Brassica oleracea (wild cabbage): 106306076
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Entry
106306076 CDS
T04124
Name
(RefSeq) small RNA 2'-O-methyltransferase
KO
K20798
small RNA 2'-O-methyltransferase [EC:
2.1.1.386
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
boe03036
]
106306076
Enzymes [BR:
boe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.386 small RNA 2'-O-methyltransferase
106306076
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Gene silencing
piRNA pathway
106306076
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsRBD2
Hen1_Lam_C
Hen1_LCD
DSRM_2
Methyltransf_12
Methyltransf_31
Methyltransf_25
dsrm
Methyltransf_11
Methyltransf_23
Methyltransf_32
MTS
La
Motif
Other DBs
NCBI-GeneID:
106306076
NCBI-ProteinID:
XP_013598001
UniProt:
A0A0D3A4N9
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All DBs
Position
C1:complement(8475519..8479788)
Genome browser
AA seq
930 aa
AA seq
DB search
MAGGGKHTLTPKAIIHQKFGANAIYTVEEVNDSAQSACPGLAIPQKGPSLFRCHLQLPDF
SVVSNVCKKKKDSEQSAAELALDKLGFRPQNDDLTVDEAWDDLVGRIKYIFSDEFLSADH
PLGAHLRAALRRNGDCCGSVPVSVIATFDSKINSRCKIINPSVESDPFLVVSCVMEAAAK
LRDFIVASPHEASLRRKNPYPPAVVEALATQVSDSVDSRKVKAVYIPCKGEEIVELDSVD
VSSGRYYLDSIAERLCLKNGNQVMISRTLGKASCGSECRLYSPITKFKSSEVSGSSSEES
SRRNARASYICGQEIHGDAVLASVGYRWKSEDLDFDDVTVKSFYRICCGMSPNGIYKISR
QAVLAAQLPASFTTKSNWRGPFPREILSMFCHQHRLADPVFAISTAPVKSLADVYRSHKN
LKVSGGSDDADDENLSKEKEDAPGLGNGFRCEVKVLTKSQGLVLECSPKKFYEKENDAVQ
NASLKALLWFSKFFDDMDVVGSDSDDEEDIKSPSTTHAFTIPPNLGNGDSSRTKNVPSVE
EKRVPSITNGSVVSICYSLSLEVDPEFSTDGEVREGNEEDMESEEDAEYYEPSIDLIESH
EEIEFEIGTKAMNPLIETAVTQMTVGEFASFNATLFAAAEALILAASSDTARTRYLLSKH
PQLVYSIILLGVKGPSEERMEAAFFKPPLSKQRVEYAVKHIKNSSASTLADFGCGSGSLL
DSLLDYPTTLQTIIGVDISPKGLARAAKMLHVKLNKEACNVNTATLYDGSILEFDSRLYD
LDIGTCLEVIEHMEEDQACEFGEKVLSLFRPKLLIVSTPNFEYNTILQRSTTPENQEENK
SESQLPKFRNHDHKFEWTREQFNHWATKLAEHHNYSVEFSGVGGSGEVEPGFASQIAVFK
REASAVESVAEGQPYKVIWEWKKGNGEKKD
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtggagggaaacatactcttactccaaaggcaatcatacatcagaagtttggt
gctaatgcaatctatacagttgaggaagttaatgactctgctcagagtgcttgtccagga
ttagcaatacctcaaaaaggaccatctctctttagatgccacttgcagctaccagacttt
tctgttgtttcaaatgtctgcaagaagaagaaagattcagaacagtctgctgctgaactt
gctctcgacaagctagggttccgtcctcagaatgatgatcttaccgtggatgaagcttgg
gatgatctcgttggacgcattaagtatatattttctgatgagtttctttcagctgatcat
cctctgggagctcaccttagagctgcattgcgaaggaacggtgactgttgcggctcggtt
cctgtttctgtaattgctacgtttgattcaaagatcaacagtcgttgtaaaatcatcaat
ccttctgtggaatcagatccgttcttggtcgtttcctgtgtcatggaggctgctgcaaag
ttgcgggacttcattgttgcatctccgcatgaagcttcactccgaaggaaaaatccatac
cctccagcagttgtagaagcattagctactcaagtatctgattccgtagatagcagaaaa
gtcaaggctgtgtatataccatgtaagggtgaggagattgttgagttggattctgtcgat
gtttcctcgggccggtattacttggatagtattgctgaaaggctctgcttgaagaatggc
aaccaagtgatgatatccaggacacttggcaaagcttcatgtggctctgagtgtagattg
tactctcctattactaaattcaagtcctcagaagtctctggaagctcaagtgaagaatca
tctcgtcggaatgcaagagcaagttacatttgtggtcaagagattcacggggatgcagtc
ttggcatctgttggttaccgatggaagtccgaggatcttgactttgatgatgtaactgta
aagtcattttacaggatatgttgcggtatgtcacccaatggcatctacaaaatctccaga
caagcagtacttgctgctcagttacctgcttcattcactacaaagtctaactggagaggt
ccgttccccagggagattctctccatgttctgccaccagcacagactagcagaccccgtc
tttgctatctctacagctcctgtgaaatcgttggctgacgtatacagatctcacaagaat
ttgaaggtctcgggaggatctgatgatgcagacgatgagaatttaagtaaggaaaaagag
gatgcaccaggattagggaatggtttcagatgtgaagtgaaagttcttacaaagtcccag
ggtctggttttggagtgttcaccgaaaaagttctatgagaaggagaacgatgctgttcag
aatgcttcgttgaaagctctcttatggtttagtaagtttttcgatgatatggatgttgtt
ggatcagattcagatgatgaagaggatatcaaatctccaagcactactcatgcttttaca
atcccaccaaacctcggaaatggagacagctcaaggaccaaaaacgtgccatcggtagaa
gagaagcgtgttccctctataacaaacggttctgtggttagcatctgctattctttgtct
ttggaagtggatcctgagttttcgactgatggagaagtcagggaaggcaacgaagaagat
atggagtccgaggaggatgctgaatattatgagccatcaatagatctcattgaaagccat
gaagagatagagtttgagattgggactaaagccatgaacccacttattgaaacagctgtt
actcagatgactgtgggtgaatttgcttctttcaatgctacactctttgctgctgccgaa
gcattgattctggctgcttccagcgatactgcaaggacacgctacctcctatcaaaacat
ccacagttggtttacagtataattctgttgggagtgaaagggcctagtgaagagcgaatg
gaggctgcttttttcaaaccgccactttcaaaacagcgtgtggaatatgcagttaaacat
ataaaaaattcatctgcttctactttggctgactttggatgcggttctggtagtttatta
gactctctacttgactatccaacaacacttcaaaccattattggcgttgacatctcaccg
aaaggtcttgcccgtgctgctaagatgctacatgtaaaattaaataaggaagcttgcaac
gtcaacactgcgacgctttatgatggttccatcctcgagttcgactccaggctgtatgac
cttgacattggcacttgcttagaggttattgagcacatggaagaagatcaagcctgtgag
tttggtgaaaaggttctaagcttgtttcgcccgaagcttctgatagtctcaacaccaaac
ttcgagtacaacacaattctccagcggtctactacaccagaaaaccaagaagaaaacaaa
tctgagtcacagcttcccaaattcaggaaccatgaccacaaattcgagtggacaagggaa
cagtttaaccactgggctactaaacttgcggaacatcataactacagcgtcgagttcagt
ggtgttggtgggtctggtgaagtagaaccagggtttgcttctcaaatagctgtgtttaaa
cgggaagcttcagctgttgagagtgtagcagaaggacagccttataaagtcatatgggaa
tggaagaaaggcaatggagaaaagaaagactga
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