Brassica oleracea (wild cabbage): 106306137
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Entry
106306137 CDS
T04124
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase 1
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106306137
Enzymes [BR:
boe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106306137
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106306137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-RING_5
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
DUF2921
zf-RING_16
zf-RING_UBOX
PHD_NSD
zf-ANAPC11
zf_RING_Vps8
zf-RING_Vps41
Prok-RING_4
zf_RING_Vps8_fungal
IBR_1
Motif
Other DBs
NCBI-GeneID:
106306137
NCBI-ProteinID:
XP_013598067
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All DBs
Position
C7:220896..245772
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AA seq
556 aa
AA seq
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MKKSNLGLGFFLCLLSILVTQQANGLRPIRDTSRSSWGDQWLFGKKEVSSGPFSPWNITG
TYRGTWKFQDTVNSSSKFPDFRNQNGNSVIELVTSPTKITGVHYVQGAVVFHDVFDNEHN
VGGAQIKVEGVYIWPFRQLRLVANSGKNGDSGLEDDYLLSNPYHLLGIFSSQVLQESPRD
RIMSKQKASPIHEMEKHCNIEIAAQISRASSTQNSGDKDYFHIEGLMESPAVDDDGDCFS
PLLLNATSINVEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAKVSIVMIGQQ
AIMDSYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKATRPSNSGEGW
ETMRRELSFLYSRFYGILLGGILIMYELHNYMRWILLVMYSFWIPQIVANVVRDSRKPLH
PYYILGMTVTRLAIPLYVFGCPKNFMRVETSKAWCIGLCAFIGFQAAVLLLQHYFGSRCF
VPRKMLPEKYNYYRRLDHDVNRSRDCVICMATIDLRRRTNDCMVTPCEHLFHSGCLQRWT
DIKMECPTCRRTLPPA
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtcgaatttgggattagggtttttcttgtgcttattatcgattctggttacg
caacaagccaatggactcagacccatcagagacacctctcgatcctcctggggcgatcag
tggctctttggtaaaaaagaagtaagcagcggaccattttccccttggaatataacagga
acttacagaggcacctggaagtttcaagatactgtaaatagctcttccaagttccctgac
ttccgtaatcaaaatggcaactctgtcatcgagttagtcactagtcctactaagattact
ggtgtccactatgttcagggtgctgttgttttccatgacgtttttgacaatgaacacaat
gttggcggtgcccaaattaaagtcgaaggtgtttatatctggcccttccgtcagctccgt
cttgttgctaacagcggaaagaatggtgattcaggcctcgaagacgattatcttctctcc
aacccctatcatctgctcggcattttttcctctcaagtacttcaagaatctccaagagac
agaataatgtcgaaacaaaaggcttctccaatacatgagatggagaagcattgtaatatc
gaaatagcagctcagatatcccgagcctcttctactcaaaacagtggagacaaagattat
tttcacattgaaggattgatggaaagtcctgcagtagatgacgacggagattgcttctcc
cccttgttgctcaatgcaacctccattaacgttgaagtctactacaacaaagctgtcaac
tatacactgatggtcacttttgtctccttcctccaggttcttttgttgatacggcaaatg
gagcacagtaacacacaatctggtgctgcaaaggtctccattgtaatgatcgggcagcaa
gccatcatggattcttatctatgccttttacatcttacagccgggatattagttgaatca
ttatttaacgcgtttgcaacagcagcgttcttcaaattcgtagtgttctcgatatttgag
atgagatatcttctggccatatggaaagcaacccggccttcaaacagcggtgagggctgg
gagacaatgaggcgtgagctctcctttctctacagccgtttctatggaatcctacttgga
ggcatattgataatgtatgagctccacaactacatgcggtggatcctccttgtcatgtac
tcattttggattccgcagatagttgcaaacgttgttcgtgattctagaaagcctctgcac
ccttattatatcttggggatgacggttacacggcttgccataccgctgtatgtatttgga
tgccccaagaacttcatgcgtgtagagaccagcaaggcctggtgtataggcctgtgcgcg
ttcatcgggtttcaagctgctgttcttcttcttcagcattatttcgggtcgcgttgcttt
gttcctcggaagatgctacctgagaaatacaactactacagacgattggatcatgatgta
aacagaagcagggactgcgtaatctgcatggccacaattgatctcaggaggcgcactaat
gattgcatggtaacgccgtgcgagcatttattccactcgggatgcttacagagatggacg
gacataaagatggagtgcccaacatgtcgtcgcacacttcctccagcttaa
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