Brassica oleracea (wild cabbage): 106306208
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Entry
106306208 CDS
T04124
Name
(RefSeq) DNA-directed RNA polymerase II subunit 2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03020
RNA polymerase
boe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106306208
09124 Replication and repair
03420 Nucleotide excision repair
106306208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boe03021
]
106306208
03400 DNA repair and recombination proteins [BR:
boe03400
]
106306208
Enzymes [BR:
boe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106306208
Transcription machinery [BR:
boe03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
106306208
DNA repair and recombination proteins [BR:
boe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106306208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
106306208
NCBI-ProteinID:
XP_013598194
UniProt:
A0A0D3A4X4
LinkDB
All DBs
Position
C1:complement(9045927..9052362)
Genome browser
AA seq
1189 aa
AA seq
DB search
MDYNNEYEQEPTYIEEDDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV
DESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRN
LTYSAPLYVDVSKRVLKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLFQNSEKDLTE
LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAENQNRPP
STMFVRMLARASAKGGSSGQYIRCTLPYIKAEIPIIIVFRALGFVADKDILEHICYDFAD
NQMMELLRPSLEEAFVIQNQQVALDYIGKRGAPMGVTKEKRIKYAKDILQKEMLPHVGVG
EFCETKKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRD
VRSYVQKCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY
ASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVG
SAAYPILEFLEEWGTENFEEISPSVIPQATKIFVNGMWVGVHRDPDMLVKTLRRLRRRVD
VNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDNQRLLIKKRDIYALQQRESAEEDGWHH
LVAKGFIEYIDTEEEETTMISMTISDLVQARLRPDEAYSETYTHCEIHPSLILGVCASII
PFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQ
LPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR
PDRASTMGMRHGSYEKLDDDGLAPPGTRVSGEDVIIGKTTPISQDEAQGQSSRYTRRDHS
ISLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED
MPWTIEGVTPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
LHKCGYQMRGFERMYNGHTGRPLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
AEGRSRDGGLRFGEMERDCMIAHGAANFLKERLFDQSDAYRVHVCETCGLIAIANLKKNS
FECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKGLKNAKGRK
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggattataataacgaatacgaacaagaaccgacttacatcgaagaagatgacgacgag
gagatcacccaggaggacgcctgggcggttatctctgcctatttcgaagagaaaggtctc
gttcgccagcagctcgattccttcgatgagtttatccagaacactatgcaagaaatcgtc
gacgagtccgctgatatcgagatccgacctgaatctcagcacaatcctggccaccaatct
gatttcgccgagacaatctacaagattagttttggacagatttatctgagtaaacccatg
atgacggaatctgatggagagactgccaccttgttccctaaagctgcgaggttgagaaat
ctcacgtactcagctcctttgtatgtcgatgtttctaagagagtattaaagaaagggcat
gatggtgaggaagttacggagacgcaggattttaccaaagttttcatcggaaaggttccc
atcatgctccggtctagttactgtaccttgtttcagaactcggagaaagatctgacagag
cttggagaatgtccttatgatcagggcggatacttcattatcaatggcagtgaaaaggtt
ctgattgctcaggagaagatgagcacgaaccatgtttatgtttttaagaagagacagcca
aataagtatgcgtatgttggcgaagtccgttccatggctgagaaccaaaataggcctcca
agcacaatgttcgttcgcatgcttgctcgtgctagtgcaaaagggggttcatctggacag
tatattcggtgtactctcccttacatcaaagcagaaattcctattatcattgtatttcgt
gcattgggatttgttgccgataaggacattttggaacacatttgctatgactttgccgat
aaccagatgatggagttgctcaggccttctttagaagaagcatttgttattcaaaatcag
caggttgctctcgactatattgggaaacgtggtgcacctatgggtgtaaccaaggaaaag
aggataaagtatgcaaaagatatccttcagaaagaaatgcttcctcatgtaggagttggg
gagttttgtgagacgaagaaagcttactatttcgggtatatcatacaccggctgctgctt
tgtgcacttggccgaaggccagaagatgatcgggatcattatgggaacaaaaggctggat
cttgctggtcctttacttggagggctatttagaatgcttttcagaaagctgacgagggat
gtgagatcttatgtacagaagtgcgttgacaatggcaaagaagtcaatcttcaatttgcc
attaaggctaaaacaatcacctctggcctgaaatattctcttgctactgggaactggggc
caggcaaacgctgctggcacaagggctggagtctctcaggttctaaatcggttaacatat
gcttccactttgtcacatctgaggcgtctcaattctcctattgggcgtgaaggaaaattg
gcaaaaccaagacaactgcacaactcacagtggggtatgatgtgccctgctgaaacacct
gaaggacaggcgtgtggtctagtgaaaaacttggcgctcatggtctatattacagttggg
tcagctgcttatcccatcttggaatttctggaagaatggggaactgagaattttgaggaa
atctctccatcagttataccccaagccacaaaaatctttgttaatggaatgtgggttgga
gttcatcgagatcctgacatgttggtgaaaacgttgagacgtttgagaagaagggttgat
gttaacactgaagttggcgttgttagagatattcgtctgaaagagctccggatatacact
gattatggtcgttgtagtcgtcccttgtttattgtggataaccagaggctgttaataaag
aagagagatatctatgctctgcaacaaagggaaagtgcagaagaagatggttggcatcat
ctagttgcaaaagggtttatagaatacatagacacagaggaagaggagacgacaatgata
tccatgactatcagtgatctggttcaagccagactccgtcccgacgaggcatattctgaa
acttacacacactgtgagattcacccttcgttgatattgggcgtatgtgcttcgattata
ccttttcccgaccataaccagtcacctcgtaatacatatcaatctgctatgggaaagcaa
gctatgggaatatatgtcaccaactaccaatttcgcatggatacattagcctatgttctc
tattaccctcaaaagcctctggttaccacacgagctatggagcatcttcattttaggcaa
cttccagcagggattaatgctattgttgccatttcttgctactctggatataatcaagaa
gattctgtcatcatgaatcagtcttcaatagaccgtggtttctttagatccttgttcttt
cggtcatacagggacgaggagaaaaaaatggggacccttgtcaaagaagactttggacgc
ccagacagggcaagtacgatgggtatgcgacatggttcttatgagaaactggatgatgat
ggtcttgcacctcctggtactagagtttcaggtgaagatgtaatcattgggaaaaccact
cccatatctcaagatgaggctcaaggacaatcatcacggtacaccagacgtgatcatagt
ataagcttgcgacatagtgaaactggaatggtcgatcaggtgttgttgaccacaaatgct
gatggtttgaggtttgtgaaagtgagagttagatctgttcgtatccctcaaattggagac
aaattcagcagtagacacggtcagaagggaactgttggcatgacctacacacaggaggac
atgccttggacaattgaaggcgttacccctgacattatagtgaatccacatgctattccc
tctcggatgacaattggacagctgattgagtgcatcatgggaaaagtggcagctcatatg
ggaaaagaaggagacgcgactccttttacagatgtcacggtggataatataagcaaagct
ctccataaatgtggctaccaaatgcgtggatttgagcgaatgtacaacggtcacacgggc
agaccactcacagctatgatattcctcggaccaacttattaccaaaggttgaagcatatg
gttgatgacaagattcactcgcgtggacgaggtcctgtgcagatcttaacaagacagccg
gctgaaggacgatcccgtgacggtggtctgcgttttggagaaatggaacgcgattgcatg
attgcacacggtgctgccaacttcctgaaagagaggctgtttgatcagagcgatgcgtat
agggtacacgtgtgtgaaacctgtgggctcatcgccattgcaaacctgaaaaagaattct
ttcgaatgcagaggttgcaagaacaaaacagatatcgttcaggttcacattccatatgct
tgcaaattgctcttccaagaacttatgtcaatggcgattgcaccacggatgcttactaaa
ggcttgaaaaatgctaaaggcagaaagtga
DBGET
integrated database retrieval system
