Brassica oleracea (wild cabbage): 106306309
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Entry
106306309 CDS
T04124
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
boe03000
]
106306309
Transcription factors [BR:
boe03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106306309
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
106306309
NCBI-ProteinID:
XP_013598337
UniProt:
A0A0D3DAB0
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Position
C7:30516786..30522368
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AA seq
591 aa
AA seq
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MAASSSSAASFFGVRQDEQSHLLPPNSSAAVPPPPPPPHHRPPQPQQPLEAPPQKKKRNQ
PRTPNSDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEV
KRKVYLCPEPSRVHHDPSRALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSK
TCGTKEYRCDCGTLFSRRDSFITHRAFCDALAQESARHPTSLTSLPSHHFPYGQNTNNSN
NNTSSMILGLPHIGNPQNLDHQSGDVLRLGSGGGGGGGASRSSSDLIAANASGYFMQEQN
PSFHDQQDHHQHQQQGFLAASNNIKPSPMNFQQSLMQFSNDNHNSPSSNLFNLSFLSGNN
GIASGTSNPNAAAVPSGNHMISNHFGGENAVGGSGGGSTGLFPNNLMSSAGRINSGAVPS
LYSSSMQNPNSASHMSATALLQKAAQMGSSTSSSNNNTNNASSILRSFGSGMYGENESNL
HDLMNSFSNPGATGNSANGVDSQFGTYGGVNKGLSADKQNMTRDFLGVGQIVRSMSGSAG
FQQQQQQQHGNGGRERVGSSSDSADRNSMNVNPGGGGSTSSPPYGIHHASF
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcttcatcctctgctgcttccttctttggagttcgacaagatgaacagtct
cacctgcttcctcctaattcctctgcagccgttcctcctcctcctcctcctcctcaccac
cggccaccgcagcctcagcaaccccttgaagctccaccgcagaaaaagaaaagaaaccaa
ccaagaactccaaattcagatgcagaagtgatagctttatctccaaagacactaatggct
acaaacagattcatatgtgaagtatgcaacaaagggtttcaaagagaacagaatctacaa
cttcaccgaagaggacacaatcttccatggaaacttaagcaaaaatcgaccaaagaagtg
aagaggaaagtgtatctttgtccggagccctcgcgcgtccaccatgatccgtcacgtgct
ctcggagacctcaccggaatcaagaaacattattaccgtaaacacggtgaaaaaaagtgg
aaatgcgagaaatgttctaagcgttacgctgttcaatctgattggaaagctcactccaag
acttgtggtaccaaagaatatcgttgcgattgtggtacactcttctccaggcgagacagt
ttcattacacatagagccttctgtgacgcgttggctcaagagagtgcgagacacccaact
tctttgacttctttgccaagtcaccactttccctacggacaaaacaccaacaactccaac
aacaacacttcaagcatgatccttggtttgccccacattgggaacccacaaaatcttgat
catcagtccggtgacgttcttcgacttggaagcggcggaggaggtggagggggcgcctca
cgatcttcctcagatctcattgctgcaaatgcttcaggttacttcatgcaagagcaaaac
cctagctttcatgatcagcaagaccatcatcaacatcaacaacaagggtttttggctgca
agcaataacatcaagccatctccaatgaattttcagcagagtctgatgcagttctcaaat
gataaccataattctccttcctccaatctcttcaatctaagcttcctatctggaaacaac
ggaattgcttctggtacaagcaaccctaatgctgctgctgttccttcgggtaatcatatg
atttcaaaccattttggtggtgaaaatgctgttggaggaagcggaggaggaagtactggt
ctcttccctaacaatctgatgagttcagcaggcagaatcaattcaggagcagtgccttca
ctctatagctcgtcaatgcaaaaccctaattcagcatctcacatgtcagccactgctctt
cttcagaaagctgctcaaatgggttcatcaacctcaagcagcaacaacaatacaaacaat
gcctcgtcaattctaagaagctttgggagtggaatgtacggagaaaacgagagtaatctt
cacgatttgatgaactctttctccaaccctggcgcaactggaaacagcgctaatggagta
gattctcagtttggtacgtacggaggagtgaacaaaggactaagcgctgataaacagaac
atgactagagactttcttggagttggacagatcgtaagaagcatgagtggaagcgcaggg
tttcaacaacaacagcagcagcaacatgggaatggtggtagagaaagagttggctcttcg
tcggattccgccgatagaaacagcatgaatgtgaatcctggtggtggtggttcgacaagt
tcaccaccgtatggaatccatcatgcaagtttctag
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