Brassica oleracea (wild cabbage): 106306316
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Entry
106306316 CDS
T04124
Name
(RefSeq) protein HASTY 1
KO
K14289
exportin-5
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106306316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
boe03016
]
106306316
03036 Chromosome and associated proteins [BR:
boe03036
]
106306316
Transfer RNA biogenesis [BR:
boe03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
106306316
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
106306316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
106306316
NCBI-ProteinID:
XP_013598340
UniProt:
A0A0D3DCE0
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All DBs
Position
C7:35932905..35940175
Genome browser
AA seq
1204 aa
AA seq
DB search
MDASNSSTASNVAQAILAVLDYNSTPDARRAAVAFLESVKSGDIRVLAHVSLLLVKKECS
SEIRLHAFKMLQHLVRLRWEELSPSERRDFAKVSVDLMSEIASPSEEWSLKSQSAALVAE
IVRREGPDLWQELFPSLTSLSAQGPLQAEVVSMMLRWLPEDITVHNEDLEGDRRRLLLRG
LTQSLPEILPLLYNLLERHFGAAMNEASRQQVDLAKQHAAVVIACLNAINAYAEWAPVLD
LSRYGIINGCGALLSSPDFRLHACDFFKLVCSRKRPSDVSGTEFDAAISSLFQSLMNVSR
EFLYRSASCAAGIDESDYEFAECICESLVSLGSTNLQCIATDGGVLALYLEQMLGFFQHF
KLGLHFEAMLFWLAFMRDLLTKPKAAANPSGEGLAVGGIQSSSQVDNEKKKILGLISDDI
ASTILDVSFQRMLKKEKVPPRIAPSLGPLELWSDEFEGKGDFGQYRSRLLDLVKFIASHK
PLVASTKISERIITLIKDLLASPVPLQDVAVLDSQQLAFDCIVATVFDGFSEFAGGGSDV
HFSLRGIFEGLLQQLLSLKLTEPELIKMHGHYLDAMGPFLKYFPDAVGNVISKLFEMLTS
LPHIVKDPATSTSRVARLQICTSFIRIAKTADKSVLPHMKSIADTMAYMQREGTLLRGEH
NILGEAFLVMASAAGAQQQQEVLAWLLEPLSQQWIQSEWQNCYLSDPMGLVRLCSNTPFM
WSLFHTVTFFEKALKRSGHRKSNLNTTSVTSQDLHPMAHHLSWMLPPLLKLLRVIHSLWS
PSVYQTLPPEMRAAMTMADVERYSLLGEAIPKFSKVSSVYADGSFDGGKEGQSEANESDV
RNWLKGIRDSGYCVLGLSATIGDTFFKCLDANYVAVAVMENLQSMEFRHMRQLIHSFVVY
VVKSCPADMWETWLEVLLHPLFIHCQKAVSSSWASLMREGRAQVPDSFGVQNGPDMKLEV
MEEKLLRDLTREIANLLSTMASPGLNPGLPVLEHSGPVGRIDVSSPKDLLAFKSNSMVGF
LLNHKNVALPALQICLEVFTWTDGETTTKVCCFCGVVVLLAILTNNVELREFVSKDLFSA
VIRGLAMESNAVNSADLVNLCREIFIYLSDRDPAPRQVLLSLPCLTPNDLRAFEEAMGKT
LSPKEQKQLMRSLLLLGTGNNLRALAAQKTMNVITNVTLRTRGPASTSEAKEDEGETIGL
ASVL
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atggatgctagcaacagcagcacagctagcaacgtggctcaagcgatcctcgccgtcctc
gattataactccactcccgatgctcgcagagccgccgttgcattcctcgaatctgttaaa
tctggagatatcagggttctagcacacgtttccttacttctagtgaagaaggaatgctct
tcagagatccgtctgcatgccttcaaaatgttacagcatcttgttagactacggtgggaa
gaattaagcccctcagaacgcagggactttgctaaggtctccgttgacctaatgtcagag
attgctagtccatctgaggaatggtctctgaagagtcagtcagctgcccttgtagctgag
atagtcagaagagaaggccccgatctttggcaggagttgtttccttcactaacctccttg
tctgcacagggcccattacaagctgaagtggtctcgatgatgctcagatggcttcctgaa
gatattacagttcacaatgaggacttggaaggtgacaggcgtcggctactgttgcgggga
cttactcaatctttgccggagattttacctttgttgtataatcttctcgagagacacttt
ggagctgcaatgaatgaagctagtaggcaacaagttgacttagcaaaacagcatgcggct
gtggtcatagcttgtttaaatgccatcaatgcatatgccgaatgggctcctgttttagat
ctttctagatatggaatcattaacgggtgcggtgcgttactttcctctcctgacttccgt
cttcatgcttgtgattttttcaaacttgtctgctcaagaaaaagacctagtgatgtttct
ggtacagaattcgatgctgcgattagcagtctgtttcagagtctgatgaatgtctccaga
gagttcttatacagatcagcttcatgtgctgcgggtatcgatgaaagtgattatgagttt
gctgagtgtatatgtgaaagtttggtttctttaggctcaacaaatctgcagtgtattgct
actgatggtggtgtactggctctctaccttgaacagatgcttggtttctttcaacacttt
aagttgggtcttcacttcgaagcaatgctcttctggctggcatttatgagggatttacta
acaaagccaaaggctgccgctaatccaagtggagagggactagcagttggtggcattcaa
agttcaagccaagttgataacgaaaagaaaaagattttaggtcttattagtgatgacatc
gctagcacaatcctggatgtatctttccagcggatgctcaagaaagaaaaagtccctcct
cgaattgctccttctcttgggcctttagaactgtggagtgatgagttcgaaggaaaggga
gactttggccaataccgatcaaggcttttagacttggtcaagtttattgcttctcacaag
cccctcgttgccagtactaaaatatctgaaaggattatcaccctcattaaagatctattg
gcttctccagtgcctcttcaggatgtagcagtgttggacagccagcaattggcttttgat
tgtattgtagcaacggtttttgatggattcagtgagtttgccggtggtggttctgatgtt
catttttcattgcgtggaatatttgagggcttgcttcagcagcttctctcattgaaattg
actgagccggaacttataaaaatgcatgggcactatctggatgcaatgggtccctttctc
aagtatttcccagatgcagttggaaatgtgatcagcaaattgtttgaaatgcttacctct
cttccacacattgtcaaggatccagcaactagtacttcaagagtcgcaagattgcagatt
tgcacgtcttttatacgtatagctaaaacagctgataaaagtgttctgcctcacatgaag
tcgattgctgatacaatggcatatatgcaaagagagggaacgttactccgtggagagcat
aacattctgggtgaagcatttcttgttatggcttctgcagcaggagctcaacagcagcaa
gaagttcttgcttggttgctggagccattgagccaacagtggatccaatcagagtggcag
aattgctatctatcagaccctatgggtctcgttcgtttgtgctccaacacccccttcatg
tggtccttgttccacaccgttacattctttgagaaggcactcaagagaagtggacacaga
aaaagcaacttgaatacgacctcagtaacaagtcaagatttgcatcctatggctcatcat
ctttcttggatgttgccacctctcttaaagcttctccgtgttatccattccctttggtct
ccctcagtatatcaaacactacccccagaaatgagggcagcgatgacaatggctgatgtt
gagcgatacagtctccttggggaagcaattcctaaattttcaaaagtctcctcggtttat
gctgatggatcttttgatggtggtaaagaaggacaatccgaggcaaatgaatctgatgtg
agaaattggttgaaagggatccgagatagtggatactgtgtgttgggtctatcagcaaca
atcggagatacattcttcaaatgcctagatgctaactatgtggcagtagcagtcatggag
aacttacagtcaatggagttcaggcacatgcgacagcttattcattcctttgttgtttat
gttgtaaaatcttgtccggcagatatgtgggagacatggcttgaagttctcctgcaccca
ctatttattcattgtcagaaagctgttagctcctcttgggccagtcttatgcgtgagggc
agagcacaagttccagattcgtttggtgtacaaaatgggccggacatgaaacttgaagta
atggaagaaaaactgctgagggatctaactagggagattgccaacctcctttcaacaatg
gcttctcctggtttaaaccccgggcttcctgttctggagcattcaggccctgtgggacgt
attgacgtgtcttctcccaaggatttgcttgcattcaaatccaactctatggttggcttc
ctcctgaatcacaaaaacgtggctctcccagctctgcaaatctgtttggaagtgtttaca
tggacagatggggaaacaaccactaaagtctgttgcttttgtggtgtggttgttctgcta
gcgatcctgacaaataacgttgagctcagagaatttgtgtcaaaggatttgttctctgcg
gtcattagaggcttagccatggagtcaaatgccgttaacagtgctgatctagttaaccta
tgccgtgaaatatttatttatctctctgacagagacccagcccctcgccaggttttgctt
tcacttccttgtcttacacccaacgacttgcgtgctttcgaagaagctatggggaaaact
ctaagtcccaaagaacagaagcaactcatgaggagcttgttgctgttaggtacagggaac
aacttaagagcacttgctgctcagaagaccatgaatgtcatcaccaacgtcactttaagg
actcgcggaccagcaagtacttccgaagctaaagaagacgaaggggaaacaatcgggctg
gcgagtgttttgtga
DBGET
integrated database retrieval system
