Brassica oleracea (wild cabbage): 106306352
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Entry
106306352 CDS
T04124
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106306352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
boe03032
]
106306352
Enzymes [BR:
boe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
106306352
DNA replication proteins [BR:
boe03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
106306352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_exo2
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
106306352
NCBI-ProteinID:
XP_013598386
LinkDB
All DBs
Position
C7:complement(23950409..23958847)
Genome browser
AA seq
1536 aa
AA seq
DB search
MSGDNSTEAGRKRSRGAEAATRKEALERLKAIRQGGLRNLAASGGGYDIRIEEPIFDTVD
DDEYDAIVSRRREEARGFVVDDGEDGDLGYGDEGEEEDFTKPSGPDSTDESDDGGGFSGR
LRKKKAEKKKGKEQPQVKKVNPALKAAATITGEGRLSSMFTSSSFKKGKETDTVKCEGIL
DEVLAEVTPDDLDRERHRRRKQPPTVPVMFSRNKNVVSVTSSMAMKDSEPTSDRVFMEKE
LVKEMKEEVVTESEVTPPHDSEKMELPGSDGVVEDGSNNRRQSEAKAESEVKDVFTLNAT
VDLKEKDSALSATAGWKEAMVKGGTENGAPLSSNCEGQTEFDLDADGSLRFYILDAYEEA
FGASMGTIYLFGKVKMGDTYKSCSVVVKNIQRCVYAIPNDSVFPSHELITLEQEVKDSKL
SPESFRGKLHEMASNLKNEISQQLLQLNVSSYSMALVKRNYAFERPDVPVGEQYVLKINY
PFKDPPLPEDLKGESFSAVLGSNTSALELFILKRKIMGPSWLKISNFSTNSPSQRVSWCK
FEVTVESPKVITVLVSEEKVAHPPAVVTAINLKTIVNEKQNISEIVSASVLCFHNAKIDV
PMPGPERKRSGILSHFTVVRNPEGTGYPIGWKKEVADRNSKNRCSVLSFENSERALLNRL
FLELNKLDSDVLVGHNISGFDLDVLLQRAQACKVLSSMWSKIGRLKRSSMPKLKGNTNYG
SGATLGIMSCIAGRLLCDTDLCSRDLLKQVSYSLTDLSKTQLNRDRKEISPNDIPKMFQS
SKTLVELIECGETDAWLSMELMFHLSVLPLTLQLTNISGNLWGKTLQGARAQRIEYYLLH
TFHSKKYILPDKNSQRMKEIKSSKRRMNHGPEGHNVDELDADLALENDPSKDNKAKKGPA
YAGGLVLEPKKGLYDKYVLLLDFNSLYPSIIQEYNICFTTIPRSEDGVPRLPSSQTPGIL
PKLMEHLVSIRKSVKLKMAKETGLKYWELDIRQQAIKLTANSMYGCLGFSNSRFYAKPLA
ELITLQGREILQRTVDLVQNHLNLEVIYGDTDSIMIHSGLDDIEEVKAIKTKVIQEVNKK
YRCLKIDCDGIYKRMLLLRKKKYAAVKLQFKDGKTCEDIERKGVDMVRRDWSLLSKEIGD
LCLSKILCGGSCEDVVEAIHSELMKIKEEMRNGKVALEKYVITKALTKSPEAYPDSKSQP
HVQVALRMRQRGYKEGFNAKDTVPYIICYEQGNTSSASSAGIGERARHPDEVKSEDSRWL
VDIDYYLAQQIHPVVSRLCAEIQGTSPERLAECLGLDPSKYRSRSNDATGSDPSTALLFA
TSDEERYKSCEPLALACPNCSAAFNCPSITSSVYASISKKSETEESDSTFWLKLQCPKCE
PEGSTGRISPAMISNQVKRQIDGFVSMYYKGIMMCDDESCKHTTRIPNFRLLGDRERGTV
CPNYPNCNGTLLRKLLTPSLALLQYTEADLYKQLSYFCHILDTQCNLEKQMDVGVRIQVE
KALTKTRPAVQAAASMARSIRDRCAYGWLQLTDIAI
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgataactcgacggaggctggccgaaaacgaagccgaggcgcggaggcagcg
actaggaaggaagctctagagcggctgaaagcgattcggcaaggaggacttcggaatcta
gcagcttcaggtggcggctacgatatcaggatagaagaaccgatcttcgacaccgtcgat
gacgacgagtacgacgcgatcgtgtcccggcggcgcgaggaggctcgcggattcgtagtc
gacgacggggaagacggagatctgggttacggcgacgaaggcgaggaggaggatttcacg
aagcccagtgggcctgactcgactgatgaatcggacgacggcggtggatttagcgggaga
ctgaggaagaagaaagctgagaagaagaaagggaaggaacagcctcaggttaagaaggtg
aatccggcgctcaaggctgcggctactattacaggtgaagggagactctcttcgatgttc
acatcttcgagtttcaagaaggggaaggagactgatacggtaaagtgcgagggtattctt
gacgaggttttagctgaggtaactcctgatgatttggatagagaaaggcataggagaagg
aaacaaccacctacagttccagttatgttctctaggaataaaaatgtggtttctgttacc
tccagcatggcaatgaaggattcagaacccacaagtgatcgtgttttcatggagaaggag
ttggtgaaagagatgaaagaagaagttgtgacagaatctgaagtcacccctccgcatgat
tccgagaagatggagttacctggaagtgatggtgttgtagaggatggatcaaacaataga
agacaaagtgaagcgaaggctgagtcagaagtgaaggatgtgtttacattgaatgcaacg
gttgatttgaaagagaaggattcggctttaagcgccactgctggttggaaggaagcaatg
gtcaaaggtgggactgagaatggggctccacttagttctaattgcgaagggcaaacggaa
tttgatttggatgctgatggttcacttcgtttttacattcttgacgcttacgaggaggct
tttggagcgagtatgggcacaatatatttgtttgggaaggttaagatgggagatacgtac
aagagttgctctgtggtagttaagaatatccagagatgtgtttatgctattcccaatgat
tccgtatttccttcacatgaactaatcacgctcgagcaagaggtgaaagactctaaactt
tctcctgaatcattccgggggaagttacatgaaatggcatcaaatttgaagaacgaaatt
tctcagcaattgttacaactcaatgtttccagttatagcatggcacttgtcaagagaaac
tatgcatttgagaggcctgatgtgcctgttggcgaacaatatgtcttgaagataaattat
ccatttaaggatcctcctcttccagaagacctcaaaggggagtcttttagcgctgtcctt
ggctctaacaccagtgctttggagctttttatccttaaaaggaagattatgggaccgtct
tggctcaaaatttcaaacttttctaccaattcaccctctcaacgagtgagctggtgcaag
tttgaggttactgttgaatctcccaaggttatcactgttttagtttcggaggaaaaagtt
gctcatcctcctgctgtagttacagccataaatttaaagactatagtcaatgaaaagcag
aacataagcgaaattgtttctgcgtctgttctctgctttcacaacgccaagattgatgtt
ccaatgccaggtccagaaaggaagaggtctggtattctgagtcatttcactgttgttagg
aatcctgaaggaaccggttacccaattggttggaaaaaagaagtggctgacagaaattca
aagaaccgctgcagcgttttaagttttgaaaatagtgaaagagcattgctgaatcggctg
tttctggagctgaacaaattggacagtgatgttcttgtgggacataatatatcaggtttt
gatctggatgtccttctccaaagagcccaggcttgcaaagttttgagtagcatgtggtcc
aaaattggccgtctcaaacgctcttccatgcctaagcttaaagggaacactaattatggg
tccggagctacactagggatcatgtcttgcattgctggaagactcttgtgtgatacagat
ctatgttctcgtgacttgttgaagcaggtcagttattcgttaacagatctctcaaagaca
cagctaaaccgggacaggaaagagatatcgcctaatgacattcccaaaatgtttcagtca
tctaaaacacttgtcgaacttattgaatgtggtgaaacagatgcgtggttatcgatggag
ctcatgtttcatctaagtgttcttccactcactctccagctaactaacataagtggcaat
ctttggggaaaaactcttcagggagccagggcgcagagaattgaatattacttgctacat
acattccactcgaaaaagtacatcctcccagacaaaaattcacaacgtatgaaggaaata
aagtcatcaaaaagaagaatgaatcatggtccggagggccacaatgtagatgaattggat
gctgacctggctttggaaaatgatccgtctaaggacaacaaagcaaagaagggtccagcc
tacgctggtggactggtcttggagccaaagaaaggcttatatgacaaatatgtattgctt
ctcgatttcaatagtctttacccgtctattatacaggaatataatatctgtttcacgacc
ataccacgatcagaagatggagttcctcgtttaccgtcgagtcagacacctggaattctt
ccaaagttgatggaacatttggtcagtataaggaaaagcgtcaaactaaagatggcaaag
gaaacaggtcttaagtactgggagcttgacattaggcagcaggcaataaagctcacagcc
aatagtatgtatggatgtctgggtttttccaattcaagattctacgctaagcctttagca
gagctcataacactacagggaagggagatcctgcaaagaaccgtggatcttgtccaaaat
catttaaacctagaggtgatttacggtgacacagattcaatcatgattcacagtggacta
gatgatatcgaagaggtgaaagccattaaaacaaaagtcatccaagaggtcaataagaag
tatagatgtctgaaaattgactgtgatggtatatataagaggatgcttcttcttagaaaa
aagaaatatgctgccgtcaagttgcagttcaaggacgggaagacttgcgaggacattgaa
agaaaaggtgtggacatggttcgtcgagattggagcttactttccaaggaaattggagat
ttatgcttgtctaagatcttgtgtggagggtcatgtgaggatgttgttgaagcaattcat
agcgagcttatgaagataaaagaggaaatgagaaatgggaaagttgcacttgagaagtat
gtcatcaccaaggcattaactaagtcaccagaagcgtatccagattccaaaagccaacca
cacgttcaagttgcactcagaatgaggcaacgtggttataaagaaggtttcaatgctaag
gatactgtaccatatataatctgctatgaacagggtaatactagctctgcgagctcagca
gggattggcgaacgtgctaggcatcctgatgaggtgaaatcagaagacagcagatggttg
gttgacatagattactacttggcacagcagattcatcctgtggtgtctcgtttatgcgca
gagattcagggcacaagtcctgagaggttagccgagtgtttaggacttgacccatcaaag
tatcgaagcagatcaaacgatgctactggcagtgatccttctacagcactcttgtttgct
acaagcgatgaagaaagatacaaaagctgcgagccgttagcattagcatgccccaactgc
tctgctgctttcaactgtccatctattactagctcagtctatgcgtcgatcagtaagaaa
tctgaaacagaggaatctgattctacattctggcttaagctgcaatgcccgaaatgtgag
ccagaaggtagcacgggaagaatatcccctgcaatgatatctaaccaggtgaaaaggcag
atcgatgggtttgtatctatgtactacaaaggcataatgatgtgtgacgatgagtcttgc
aagcacacaactcgcatccccaacttccgtctgcttggtgaccgtgaacggggaacagtt
tgtccaaactatcctaattgtaatggaactctcttaagaaagcttttaactccaagcctt
gccttattacagtacactgaagcagacttgtacaagcagctgtcatacttttgccacata
ttagacacccagtgcaatctagaaaagcagatggatgttggtgtcagaattcaagtagag
aaagcattgacgaagacaagacctgcggttcaggcagcagcatccatggctcgaagtatc
cgagaccggtgtgcgtacggatggctgcaactcacagacatagccatttga
DBGET
integrated database retrieval system
