KEGG   Brassica oleracea (wild cabbage): 106306437
Entry
106306437         CDS       T04124                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:boe03400]
    106306437
DNA repair and recombination proteins [BR:boe03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    106306437
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX ResIII DEAD zf-RING_2 zf-C3HC4_2 Prok-RING_4 zf-C3HC4_4 zf-RING_5 RING_XB3-XBAT31 Baculo_IE-1 zf-RING_4 zf-ANAPC11 AAA_34
Other DBs
NCBI-GeneID: 106306437
NCBI-ProteinID: XP_013598510
UniProt: A0A0D3D8N4
LinkDB
Position
C7:25155910..25161085
AA seq 1139 aa
MEMRRTEHEAAVSSSDDCKVVADTPDESYVVFRTSTGVRISSQLDGIICSNGSKSDLSDA
MPVKDEVTGDGSVTLCDDVESESYRAASLEFRVKEEPSMDFENQGEEMVIDIVEKPVMVA
QEEAQSVVEAVSRGSGNECVTVDVKQEPENLETEQSIIPTALILASKPLQVIRPKAEMLD
TPEVIDVESDFLNRLVKQERSGTHVKMEPPVEETKVGALSLSLQVREEKPVYAKKVNTEV
DARKVKVEDGDFPVERDWYLVGRSLVTATSTSKGRRLEDNEVVNFAFPSTVNLKVPNIVR
FSTKRCGEIGRLPMEWSNWAVSLLRSGKVKMLGRCVAAPSFLQMMQDIMLYVSFYIHSSI
FTDVSKSTWRIGSSPNIESTLHPLLQLFRHLTIKPYQKAEFTPQELDSRKRSLNLENDSD
ERAALLAIAKRRKGAPLCLEHNKDEEDSPESYMNRVVGAADSYNLEEMEAPSTLTCDLRP
YQKQALYWMSEFEKGIDVDKAAETLHPCWEAYRICDERAPSIYVNIFSGEATIQFPTATQ
MARGGILADAMGLGKTVMTIALILARPGRGNPEIEDDLAADVNGDTPKRKESHKALTCVK
AKGGTLIVCPMALLSQWKDELETHSMPDTVSVLSYYGGDRTQDAKAIASHDVVLTTYGVL
TSAYKQDMANSIFHRIDWYRIVLDEAHTIKSWKTQAAKATFELSSHCRWCLTGTPLQNKL
EDLYSLLCFLHVEPWCNWAWWNKLIQKPYENGDPRGLKLIKAILRPLMLRRTKETRDKEG
SLILELPPTDVQVIECEQSEAERDFYTALFKRSKVQFDQFVAQGRVLHNYANILELLLRL
RQCCNHPFLVMSRADSQQYADLDSLARRFLDKNPDSVSQKAPSRAYIEEVIQDIRDGNSK
ECPICLESADDPILTPCAHRMCRECLLTSWRSTSCGLCPICRTVLKKTELISCPTESIFR
VDVVKNWKESSKVSELIKCLEKIRMSGTGEKSIVFSQWTSFLDLLEIPLRRRGIGFLRFD
GKLAQKAREKVLKEFNETKQKTVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIM
RIHRIGQKRTVCVRRFIVKDTVEERMQQVQARKQRMIAGALTDEEVRSARLEELKMLFR
NT seq 3420 nt   +upstreamnt  +downstreamnt
atggagatgcggagaaccgaacacgaagcagctgtttcaagttcagacgattgtaaggtc
gttgcagatactcccgatgaatcctatgtggtcttcaggacatccaccggagtccgaatc
tcttctcaacttgacggtattatctgttcaaatggatccaagtcggatctttccgatgct
atgccggtgaaagacgaggtaaccggtgacggttctgttactctttgtgatgatgtagaa
tctgaatcgtatagggcggcgagtttagagttccgtgttaaggaggaacctagtatggat
tttgagaatcaaggagaagaaatggtgattgatattgtagagaagcctgtgatggttgct
caagaagaagcacaatctgtagttgaagctgtttcaagaggctctggcaacgagtgtgtt
actgttgatgtcaaacaagaacctgagaatctggagacagaacaatctattataccaact
gctctcatcttggcgtctaagccacttcaagttatccgaccgaaggctgagatgttggat
acacctgaggttattgatgtggaatcagattttttgaatcgactagttaagcaagagagg
agtggtactcatgtgaagatggaaccaccggttgaggaaacaaaggtgggtgctttgagt
ttgagtttgcaagtgagagaagagaagcctgtgtatgcgaagaaggttaatacagaggtt
gatgcaagaaaggtgaaagtggaagatggagatttcccggtggagagagactggtacttg
gttgggaggtctcttgtcaccgctacttccactagtaaaggaaggagactggaagataac
gaagttgtgaatttcgcatttccctctactgtcaacttgaaagtcccaaacattgttcgt
ttctctaccaaaagatgtggagaaattggaaggcttccaatggaatggtcgaactgggct
gtgagccttttgagatctggtaaagtcaaaatgttaggcagatgtgtagctgcgccatcc
tttcttcaaatgatgcaagatattatgctatatgttagtttctacattcacagctccata
ttcactgatgttagcaaatccacttggcggattggttcttcacctaacatagagtccacg
cttcatccgcttctgcagcttttcagacacttgacaatcaaaccttaccaaaaggctgag
tttactcctcaggaacttgactctcgcaaacgctccctcaacttggagaatgactcggat
gaaagagcagcattgttggccatagcgaaaagaagaaaaggtgctccactgtgtctcgag
cacaacaaagatgaagaagattctcctgagtcatatatgaatcgggttgttggcgctgca
gattcatataacctggaggaaatggaagctccaagtacactcacctgcgacctgagaccg
taccagaaacaagcactctactggatgtcagaatttgaaaaaggaattgatgttgataaa
gcagctgaaactctccatccttgctgggaggcttatcgaatctgtgacgagagggcgcct
tcaatttatgtgaacatcttcagcggtgaagcaacaatccagtttccaacagctacacag
atggcaagaggcggaatattggcagatgccatgggacttggaaaaactgtgatgacaatt
gcactaatacttgcacggccaggccgaggtaacccagaaattgaagacgacttggcggca
gatgttaatggagatacacctaagaggaaggagagtcataaagcactaacgtgtgtgaag
gccaaaggaggcactcttattgtttgccccatggcattgctaagccaatggaaggacgag
cttgagactcattcaatgcctgacactgtgtctgtgttaagttactacggaggggatagg
acgcaggacgcaaaagctatagcgagtcatgatgtggtcttgacaacttatggtgtctta
acctctgcttacaagcaggatatggcgaacagtattttccacagaattgattggtacagg
attgttcttgatgaagctcacactatcaaatcatggaaaacacaagctgctaaagctacg
tttgagttgtcttcacactgcagatggtgtctgacagggacccctttacaaaacaagctt
gaagatctttacagtcttctatgcttccttcatgtcgaaccatggtgcaattgggcttgg
tggaataagttgattcagaagccatatgaaaatggtgatccacgaggactaaagctaatc
aaggcgattttgaggccattgatgctgagaagaacaaaggagacgagggacaaagaagga
agtctaattcttgaacttcctccaaccgatgttcaagtcatcgaatgtgaacagtctgaa
gcagaacgtgacttctatactgcccttttcaagagatctaaagtccagtttgaccagttt
gtggcacaaggaagagttcttcacaactatgcaaacatcctcgagctcctcctccgtcta
cgccaatgttgcaaccacccttttctagttatgagccgggcagattcacaacaatacgct
gacttagacagcctcgcaaggagattccttgacaaaaaccctgactcagtttctcaaaaa
gctccctctcgggcatacatcgaagaagttatccaagacatacgcgatggcaacagcaaa
gagtgcccaatatgtctggagtctgcagatgatcccattctcacaccctgtgctcacaga
atgtgccgtgaatgtctccttactagctggcgctctacttcttgtggtctatgcccaatc
tgcaggacagtactgaagaaaactgagctcatctcatgcccaacggagagtattttccgt
gttgatgttgtaaagaactggaaggagtcctcaaaggtctcggagcttataaaatgctta
gagaagattcggatgtctggtacgggagagaagagcattgtgtttagccagtggacttcg
tttttggatctcctggagattcctttgagaagaagaggaattggatttcttagattcgat
gggaagcttgcacagaaggcgagagaaaaggtcttgaaggagttcaatgaaaccaaacag
aaaacagttctgcttatgtctctgaaagctggaggagttggtctgaatctgactgcagct
tcaaacgtcttcttaatggatccatggtggaatccggcggtggaagagcaagcaatcatg
agaattcatcgcataggacagaaaagaactgtatgcgtcagaagattcattgtcaaggat
acagtagaggaacggatgcagcaagttcaggcgaggaagcagcggatgattgctggagct
ttgactgacgaagaagtccggtcggccagacttgaggagcttaaaatgttgttccgatga

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