Brassica oleracea (wild cabbage): 106306728
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Entry
106306728 CDS
T04124
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106306728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boe03021
]
106306728
03036 Chromosome and associated proteins [BR:
boe03036
]
106306728
Transcription machinery [BR:
boe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106306728
Coactivators
SAGA/TFTC/STAGA complex
106306728
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
106306728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
OSCP
Motif
Other DBs
NCBI-GeneID:
106306728
NCBI-ProteinID:
XP_013598908
LinkDB
All DBs
Position
C7:complement(24775162..24780070)
Genome browser
AA seq
786 aa
AA seq
DB search
MDPSIFKLLEEDEDESMHSGADVDAFQAALNRDIEGSASLPTNPPGNSQSPNEQFTTWTN
GIGDSNMNLHTQHSTQIKEEQQGSGGVDNQHQRDLKHLQHNHPQDLHQAGQRWENPSQVT
GLQNPTGGNEPERPHNQETESQYSKLQKMTSQQPRGVEQPVNPMNRNPKQVPFAALLPSL
IAQLDKDRAMQLRTLYSRLKKNEIPKEGFTRHVKEIVGDQMLRMAVSKLQQVGYNQGKMG
IQAPTEINNKKSESDPRGIVHLNQLPPSTGSSVPVQGFTNHPQHNQMQRPPSSFPMYTSS
GSFHSFPGPSTNVSGSSLRPHLHDSHMRNVALNQAVGSTGLGVPPQSTTNMMTMPKFERP
ASVNDPSRVQGGATSHFQNSSSLPLNSVPSQGSSLSHVKQESVEQSFEQNKAASGTSKED
LEKESSRMLLSAPSNIDANTSMNSRGPLGTSQAGFNARMPPKKPTVGQKKQLETLGSSPP
PPSKKQKVVQSSMDQSIEQLNDVTAVSGVNLREEEEQLFSGGKEDSRVSEASRRVVHEEE
ERLILQKSPLQNKLAKIMAKAGLKQISNDVERCLSLCVEERMRGLLTHIIRMSKQRVDTE
KSRHRTFITSDIRLQINEMNQKVKEEWEKKQAEAEKLKKPSDSEDGDSGVDGEKEKEDNR
SKGLKGNKEDDDKMRTTAANVAARAAVGGDDTFLKWQLMAEARQKSVSETGKDGNQKTTS
GGGRNSKERQDGGRRFSGPGGRRLGKNQGSSLQPKVVRKISVKDVVAVLEREPQMSKSTL
MYRLIQ
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggatccttcaattttcaagctcctcgaagaagacgaggatgaatcgatgcattcggga
gctgatgtagacgccttccaggccgctcttaatcgagatattgaaggttccgcttcactg
cccactaacccccctggaaacagccagtctcccaatgaacagttcaccacatggacgaat
ggtatcggagattctaatatgaatctccatacgcaacacagcacccagattaaggaggaa
caacaaggatcaggtggtgtagacaatcaacaccaacgtgatttaaaacatttgcaacac
aaccatcctcaagacctccaccaagcaggtcaacgctgggagaatccttcacaggtaact
ggattacagaatcctactggtggtaatgaaccagaaagaccgcataatcaagagactgaa
tctcagtattcaaaactgcaaaagatgactagtcaacagcctcgtggagtggaacagcct
gttaaccccatgaaccgcaaccctaagcaagtaccatttgctgctttgcttccttcctta
atagcccaactcgataaagacagagcaatgcagctccgtaccctatattctagacttaaa
aaaaatgaaatccccaaagagggtttcacacgacatgttaaggagattgtaggcgatcag
atgcttaggatggcagttagtaaactacagcaggtgggttataaccagggaaagatggga
attcaagctcctactgaaatcaataataaaaaatctgagtctgatcctcgtggaatcgtc
caccttaaccaacttccgccgtcaacaggcagttcagttcctgtgcagggatttacaaat
catcctcagcataaccagatgcagcgcccaccaagttcgtttcctatgtataccagctct
ggtagttttcactcattcccgggtccaagcaccaatgtttctggttcctcgttgagacca
caccttcatgattcccatatgagaaatgtggcacttaaccaggccgtgggatcaactggt
cttggagtacctccccagtctaccacaaacatgatgactatgcccaagtttgagaggcca
gcttctgtaaatgatcctagtagggttcaaggcggcgctacttcacacttccagaacagc
tcatcgttgcctctaaattctgtacctagtcaaggatcatcactgtcccatgtgaagcag
gaatcagttgaacaaagttttgaacagaataaggcagcctcaggaacttcgaaggaggat
ttagagaaggagtcctctagaatgcttttatccgcacctagcaatattgacgctaacaca
tcaatgaattctcgtggtccgttgggtacgtcacaagcaggatttaatgctaggatgcca
cccaaaaagccaactgtcggtcagaagaaacaactggagacattgggttcttcaccgcca
ccaccaagcaagaagcaaaaagtagtgcagagttctatggatcaaagtatcgaacagctc
aatgatgtcactgcagtcagtggtgtcaatctcagggaagaggaagaacaattattttcc
gggggcaaggaggatagtcgtgtttctgaagcatctcgtagagttgtgcacgaagaggaa
gaaagattaattttgcagaaaagtccactgcagaataagctggcaaaaattatggcgaaa
gctgggctaaagcagataagcaatgatgttgaacggtgcttgtctttgtgtgtggaggaa
aggatgcgaggactattaactcatataattcggatgtcaaagcagcgggttgatactgag
aaatctagacaccggacctttatcacgtcagatattcggctacaaatcaacgaaatgaac
cagaaggtgaaagaggaatgggaaaagaaacaggctgaagcggaaaaacttaagaaacca
agcgacagtgaagatggtgatagtggagtggatggtgagaaggagaaagaagataaccgt
tcaaagggtttgaagggaaataaagaggacgacgacaaaatgagaacgacagcagcaaac
gttgctgctcgtgctgctgtgggaggagatgatacgtttttgaaatggcaattaatggca
gaagctcgtcagaagtctgtatctgaaactggaaaagatggtaatcagaaaactacttca
ggtggaggaagaaactccaaggagagacaagatggtggacgtcggttttctggccctggt
ggtcgaagattagggaagaaccaaggttcatcgcttcaaccaaaagtggtgaggaaaatc
tcggtgaaggatgtggttgctgtcctcgaaagagagcctcagatgtctaaatccactcta
atgtatcgcttaattcaatag
DBGET
integrated database retrieval system
