Brassica oleracea (wild cabbage): 106306800
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Entry
106306800 CDS
T04124
Name
(RefSeq) vacuolar protein sorting-associated protein 35A
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106306800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106306800
Membrane trafficking [BR:
boe04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
106306800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
106306800
NCBI-ProteinID:
XP_013599008
UniProt:
A0A0D3D3A1
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Position
C7:complement(4576414..4582360)
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AA seq
788 aa
AA seq
DB search
MIADGAGEDEEKWLAAGAAAFKQNAFYMQRAIDSNNLKDALKYSAQMLSELRTSKLSPHK
YYDLYMRAFDELRKLEIFFMEETRRGCSVIELYELVQHAGNILPRLYLLCTAGSVYIKTK
EAPAKEILKDLVEMCRGIQHPLRGLFLRSYLAQISRDKLPDIGSEYEGDADTVTDAVEFV
LLNFTEMNKLWVRMQHQGPARDKEKREKERSELRDLVGKNLHVLSQLEGVDLDMYRDTVL
PRVLEQIVNCRDEIAQYYLMDCIIQVFPDEYHLQTLDVLLGACPQLQPSVDIMTVLSRLM
ERLSSYAALNTEVLPYFLQVEAFSKLNNAIGKVIEAQEDMPILSAVTLYSSLLKFTLHVH
PDRLDYADQVLGSCIKQLSGKGKIHDTRATKELVTLLSAPLEKYNDVVIALKLTNYPLVL
DYLDSENKRVMATVIIRSIMKNKTIIATAEKVEALLELIKGLINDLDEPQGLEVDEDDFE
EEQNSVARLIHMLYSDDPEEMFKIISVLKNHFLTGGPKRLKFTIPPLVVSALKLIRRLPE
EGDNPFGKEASVSATKIFQFLNQIIEALPSAPSPDLAFRLYLQCAEAANKCDEEPIAYEF
FTQAYILYEEEISDSKAQVTALQLIIGTLQRMHVFGVENRDTLTHKAMGYSAKLLKKPDQ
CRAVYACSHLFWLEDHETIQDGERVLRCLKRALKIANSAQQMTSAARGSTGSVTLFIEIL
NKYLYFYEKGIPQVTVESVESMIQLIKNEESLTSDPSAESFFASTLRFMEFQKQKGGVVG
DRYEQIKV
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcagacggagcaggagaagatgaagagaaatggctcgccgccggcgctgcggct
ttcaagcagaacgcattttacatgcaacgcgctattgactcgaataatctgaaagatgct
ctcaagtattcggctcagatgcttagcgagttgcggacttcgaagctttcacctcacaag
tactatgacctctatatgagagcttttgatgagttgaggaagcttgagattttcttcatg
gaagaaactcggcgtggctgctcagtcattgaactctatgagcttgtccagcatgctggt
aacatattaccacgtttgtatctcctgtgtacagcaggatccgtttacatcaaaaccaag
gaagctcctgccaaggaaattcttaaagatctcgttgagatgtgccgtgggattcagcat
cctctacgtggtctcttcttgagaagttaccttgcgcaaattagtcgagataaattgcct
gatattggttctgaatatgaaggagatgctgatacagtcacggatgcggtggagtttgta
ctactgaattttaccgagatgaataaactctgggtcagaatgcaacaccagggacctgct
cgggataaggagaaacgggagaaagagaggagtgagcttcgtgaccttgttggaaagaac
cttcatgtgctgagccagttggaaggtgtagaccttgatatgtacagagatacagttctt
cctagagtcttagagcagatagtgaactgccgagatgagattgcccaatattacctaatg
gactgtatcattcaagtttttcccgacgagtatcacttgcaaactcttgatgtgcttctt
ggagcttgtccacaacttcagccatcggttgacattatgacagtgctttcacgtttaatg
gagagattgtcaagttatgctgccttaaatactgaagttttgccttatttcctgcaagtg
gaagctttctcaaagttgaataatgcaattggaaaggtgatagaagcacaagaagacatg
ccaattctgagtgcagtaaccctatattcttcgcttctcaagtttactcttcatgttcac
cctgatcggcttgattatgcggaccaagttttgggatcatgtattaaacaactgtctgga
aaaggaaagattcatgacacccgtgcaacaaaggagcttgtcacccttttaagtgctcct
ctagagaagtataacgatgttgttatcgcccttaaactaacaaactatccccttgtactg
gattaccttgatagcgagaacaagagagtaatggctactgttataattcgaagcattatg
aaaaacaagactattattgctacagcagagaaggttgaagcattgcttgaactgatcaaa
ggacttatcaatgacctggatgagccgcaaggtcttgaggttgatgaagatgactttgag
gaggagcaaaattctgttgcgcgtctcattcacatgttatatagtgatgacccggaagag
atgtttaagattatcagtgtcctcaagaaccatttcctgacaggagggccaaagcgctta
aagttcaccattccaccccttgttgtgtctgctctgaagctaatcaggcggttgccagag
gaaggagacaatccttttggaaaagaggcttcggtgtctgctactaaaatcttccaattt
ctaaatcagattattgaagcgctacctagtgctccatcacctgacttggcattccgattg
tacttgcaatgtgctgaggctgcgaataagtgtgatgaagagccaattgcatacgaattt
ttcacccaagcatacatcttatacgaagaagaaatttcggactcaaaggcccaggtgact
gctttacaactgataattggaacgctgcaaaggatgcacgtatttggtgttgagaataga
gacactttaacacataaggccatggggtattctgcgaaacttctgaagaaaccggaccaa
tgtcgagctgtttatgcctgctctcatctgttttggctagaagatcatgagaccatacaa
gatggagaaagggttctgcgttgtctcaaacgagcgcttaaaattgcaaattcggctcaa
caaatgaccagcgcagctcggggtagtacaggatctgttaccctcttcatcgagatatta
aacaagtacctctatttctacgagaaagggattccacaggtcacagttgaatcagtggag
agcatgatccaactgatcaagaacgaagaatcgttgacatctgacccatctgccgaatcg
ttctttgcaagtacgcttcggtttatggagttccaaaagcagaaaggcggtgttgttggt
gacagatacgagcagataaaagtatag
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