Brassica oleracea (wild cabbage): 106306809
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Entry
106306809 CDS
T04124
Name
(RefSeq) WD repeat-containing protein 70
KO
K24752
WD repeat-containing protein 70
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106306809
03036 Chromosome and associated proteins [BR:
boe03036
]
106306809
03400 DNA repair and recombination proteins [BR:
boe03400
]
106306809
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
106306809
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
106306809
DNA repair and recombination proteins [BR:
boe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Others
106306809
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
WD40_Gbeta
EIF3I
Beta-prop_SPT8
NBCH_WD40
DSE1_N
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
CFAP251_N
PAC11
Beta-prop_DCAF4
Beta-prop_NOL10_N
Beta-prop_EIPR1
Beta-prop_IP5PC_F
Beta-prop_HPS5
Pep3_Vps18
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
106306809
NCBI-ProteinID:
XP_013599018
UniProt:
A0A0D3D2B1
LinkDB
All DBs
Position
C7:580845..583520
Genome browser
AA seq
628 aa
AA seq
DB search
MEDDELEAMRAHFPLSFGKSSIVSPPTESIHSATRRADAGASSDSKPNSGFPSLSNSWIQ
SVRRPKRNPNSSGGAKSSLSPSEDDVSVSVEDDGVMVGPPPPPPARDGNDSDDEDDMIGP
PPPPPPRTADVDSDDDDDEENRYKIPLSNEIQLKGHTKIVSCLAVDNAGARVLSGSYDYT
VRMYDFQGMNSRLQSFRQIEPSEGHQVRSLSWSPTSGQFLCVTGSAQAKIYDRDGLTLGE
FIKGDMYIRDLKNTKGHICGLTFGEWHPKNKQTILTSSEDGSLRIWDVNNFLSQTQVIKP
KLARPGRIPVTTCAWDREGKRIAGGIGDGSIQIWSLKPGWGSRPDLYVGKAHTDDITSVK
FSSDGRILLSRSFDGSLKVWDLRQMKEALKAFDGLPNFYPQTNVAFSPDEQIILTGTSVD
KDSTTGGLLCFYDRTKLEIVQKVGISPTSSVVQCAWHPRLNQLFATSGDKSQGGTHILYD
PTRSERGACVCVARAPRKKSVDDYQPEPVIHNPHALPLFRDAPSRKRQREKTLKDPLKAH
KPELPMTGPGHGGRVGTTGSGLLTQYLLKQGGMIKETWMEEDPREAILKYAEVAVKDPKF
IAPAYSQTQPDTIFAKSDDEEEEGDAKK
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgatgaattggaagctatgcgagctcacttccctctttctttcggcaagagt
tccattgtttcgccgcctaccgaatccatccacagcgctactcgccgcgctgacgccgga
gcttcgtcggactccaaacctaattccggctttccgtctctgtctaattcgtggatccaa
tctgttcgccgtcccaaacgcaaccctaatagcagcggcggtgctaaatctagtctctct
ccttccgaggatgatgtatccgtatccgtagaggatgacggagttatggtgggaccacca
ccgccgccccctgcaagggacggtaatgattctgatgatgaggatgatatgatcggtcct
ccgccaccgccaccgcctcgtactgcagatgtagattcagatgacgacgacgatgaggag
aatcggtacaagatccctttgagcaacgagattcagctcaagggacatactaagattgtt
tcgtgtctggctgttgataacgccggagctagggttctctctggcagctatgactacact
gttcgtatgtatgatttccaagggatgaactccagactacagtctttcaggcagattgaa
ccatctgaaggtcaccaagttcgcagcttgagctggagtcccacttctggtcagtttcta
tgcgtcactggctctgcccaagctaagatttatgatcgtgatggtcttacccttggtgag
ttcattaagggggatatgtacatccgtgatcttaagaacactaagggccacatttgcggg
ttgactttcggagaatggcatcccaagaataagcaaaccattctgacttcttctgaagac
gggtctttgcgtatatgggatgttaataacttcctaagccaaacacaggttattaagccc
aagcttgctagacccgggaggattccagttacgacttgtgcttgggatcgtgaaggaaag
cgtatcgctggtggcattggagatggatctattcagatttggagtctcaagccgggatgg
ggaagcagaccagatttatatgttgggaaagcccacactgatgatattacctctgttaag
ttctctagcgatgggagaattctcttgtcaagaagttttgatggttctctaaaggtgtgg
gacttacggcagatgaaagaagccctaaaggcttttgacggtctccctaatttttatcct
caaaccaacgttgcctttagtccagatgaacaaatcatcctgactggaacatccgttgac
aaggacagtacaacaggaggcttgctctgcttttacgaccggaccaaactcgagattgtt
caaaaagtcggaatatctccaacttccagcgtggtgcaatgcgcttggcacccgaggttg
aatcagttatttgcaacatctggagacaaaagccaaggaggaactcacattctttacgac
ccaactcggagcgagagaggtgcatgtgtgtgcgttgcacgtgcaccaaggaagaaatct
gtagacgattaccaaccagaaccagtaatacacaaccctcatgcattaccgttgttcaga
gacgcaccaagccgtaaacgacaaagggagaagactttgaaggatcctcttaaagcccat
aagcctgagcttcccatgactggtcctggtcatggtggaagggttgggaccactggtagc
ggcttattaacgcagtatcttctcaagcaaggtgggatgataaaagaaacatggatggag
gaagatccaagagaagcaatattgaaatacgcagaggttgctgtgaaagatcccaagttt
attgcacctgcttactctcagacccaacctgacaccatcttcgctaaatcggatgatgaa
gaagaagaaggtgatgccaaaaaataa
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