Brassica oleracea (wild cabbage): 106306830
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Entry
106306830 CDS
T04124
Name
(RefSeq) preprotein translocase subunit SCY1, chloroplastic isoform X1
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03060
Protein export
boe04141
Protein processing in endoplasmic reticulum
boe04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
106306830
04141 Protein processing in endoplasmic reticulum
106306830
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106306830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106306830
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
boe02044
]
106306830
Membrane trafficking [BR:
boe04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
106306830
Secretion system [BR:
boe02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
106306830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Motif
Other DBs
NCBI-GeneID:
106306830
NCBI-ProteinID:
XP_013599045
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Position
C7:3019100..3021876
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AA seq
555 aa
AA seq
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MITVSQVSSYSSSSSNLASLSRLNHKPSSRLRSSSLYRPIFSVPTKTRNTCKANSWKNLG
LVINSRREFLFSSEVSTFDPLGINPKEASGLSSIWESFLSVLSPSLESSSGSKRDKPSSG
RGVAAAIEDSSIDFGDFFKGPLPGKFLKLLGFLALSRLGIYIPLGGVNREAFVGNLDQNS
LLTTLDTFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKKILQ
YTRYASVGFAIVQAIGQAVYLRPYVNDFSTEWVVSSVTLLTLGSVLTTYIGERISDLKLG
NGTSLLIFTSIISYLPASFGRTAAEALQEGNYTGLATIVVSFLLLVLGIVYVQEAERKIP
LNYASRYTSKAAGLQKSAYLPFKVNSAGVMPIIFSTSSLALPATLARFTGISALKNIAYG
LNPGCSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTALFIKTV
LGRISVLGSAFLAVLAAGPAVVEQITHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQ
KYKNIEFYELDKYDP
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgataacggtaagccaagtttcctcttactcttcttcttcttcaaacctcgcttctctg
tctcgtctcaaccacaaaccatcctcgagactccgaagctcttctctgtacagaccaatc
ttctccgttccgaccaaaaccaggaacacttgtaaagccaattcatggaagaatctcggt
ctggtcatcaactctagaagagagtttctgttcagctctgaggtttcgacatttgatccg
ttgggtattaatccaaaagaagcttctggcctgagtagtatttgggaaagctttctgagt
gttttgtctccatcacttgaaagctcctccggtagcaaaagagataaaccatcttctggt
cgtggcgtggcagctgctattgaggacagttccattgactttggagatttcttcaaaggc
ccattgcctgggaagttcctaaagctcctcggcttcctagctctctctcgcctcggaatc
tacatcccactaggcggagtcaaccgagaagcctttgtcggcaacttggatcagaacagc
ttgttaaccacattggacacattctccggtggtggcattggtagactcggcatatgctcc
ctcggtatcgtccctttcatcaacgcccagatcgtgtttcagcttctcgctcaagtctac
cccaagctgcaagaccttcagaagaaagaaggcgaagcggggagaaagaaaatcctccag
tacactcggtacgcttcggttggattcgctatagtacaggcgataggacaagcggtttac
ctccgtccttacgtgaatgacttcagcactgaatgggttgtttcgtccgtcacgttgcta
acacttggctctgtcctcactacttatattggagagaggatctccgatctgaagcttgga
aacggcacttcgcttttgatattcacgagtattatctcttacttgcctgcttcatttggt
agaacagcagcagaagcattacaggaaggaaactatactggtctggctaccatagttgtt
tcattcctcctcttggtacttggaatcgtctatgttcaggaagcagagaggaagattcca
ctcaactatgcctccagatacaccagcaaagcagctgggctgcagaagtctgcttatctt
ccattcaaggtcaatagtgctggagtgatgcctatcatattctccacgtcatctcttgct
ctccctgctactctagcgcgattcaccggcatttctgctctgaagaatattgcttatggc
ttgaaccctggatgttcgttctatcttccaacaaatatacttctcatagctttcttcaac
tactactacactttcctgcaacttgacccggacgatgtgagtgaacaattgaaacgacaa
ggtgcatccatccctcttgtccggcctggtaaaagcactgctctcttcatcaaaaccgtt
cttggccggatatctgttcttggatcagcatttctggctgttctagcggcgggtcctgct
gtggttgaacagatcactcacttgacagcattcagaggatttgctggaacttctgttctg
attctcgtagggtgcgcgacagatactgcaagaaaggttcaagctgagatcatctcgcag
aagtacaagaacattgagttttatgagcttgacaagtatgatccatga
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