Brassica oleracea (wild cabbage): 106306857
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Entry
106306857 CDS
T04124
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
boe04812
]
106306857
Cytoskeleton proteins [BR:
boe04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
106306857
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Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
ANAPC4_WD40
NBCH_WD40
eIF2A
PROPPIN
Motif
Other DBs
NCBI-GeneID:
106306857
NCBI-ProteinID:
XP_013599082
UniProt:
A0A0D3DDB4
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Position
C7:38027080..38032496
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AA seq
829 aa
AA seq
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MTSTKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHS
SGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKLVRTLTGHRSNCISVDFHPFGEFFASG
SLDTNLKIWDLRKKGPIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLT
EFKCHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETSGVRCLSFNPDG
KTVLCGLQESLKIFSWEPIRCHDGVDVGWSRLSDMNVHEGKLLGCSYNQNCVGVWVVDLS
RTEPCNTGDADQSNGQAEKKSGSGRDSVVLNDNNSKTIPGKLSVSQNVDPLLKETKSLGR
LSVTQNSDPSTKETKAVGRSSTSHSSESKPLGRLSVSQNSDVAKESRTLSSTGSVPSTPH
RVSLASVSKAAVSNAATSRRNFTKANPKGNPVNKAADFIQVFVPREDPRVEQAAESRAEL
DIIARTMPYSLQAADSRRSPSSKNNQDLPNAPVLEMSDSQPVEPSDIPDKNTFPSGKGGM
RGAAERSINDFRYKRYGRSNSRSRMGSPPRNHDENYDLVVSHKSSREPSPTESRKGGRFQ
TLVINRERRGRFSNFEGPVSNFPSGGNAAAPNIHPSNMFKQRGNHMPVEQGIESPSEDNI
VEDIMGKHDQFVSSMQSRLAKLQVVRRYWERNDVKNTIGSMEKMADNAVTADVLSIITER
NEIMTLDTCTSLLPILAALLASDMDQHLSVSLDLLLKLVRMYGSPIYSSLSAPASVGVDI
EAEQRIERYSRCFVELEKVKACLPSLSRRGGLVAKSVLELNLAFQEVSS
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgacttctaccaagcgagcctacaagctacaggaattcgtggcacattctgctgctgtt
aactgtctcaagatcggaaggaagtcatctagggttctggttacaggtggggaggatcat
aaagtcaatctctgggctattggtaagcccaacgccattctgagcttgtatggacactca
agcggaattgattcagtgacgtttgatgcttcggaggtcttggttgcagcaggagctgct
agtggtaccatcaaactttgggacttggaggaggcaaaacttgtcaggactctcactggc
cacagatcgaattgcatatcggtggattttcacccttttggtgagttctttgcgtctggc
tcactagacacaaaccttaagatatgggatctgcgtaaaaaaggccccatccatacttac
aagggccacactcggggagtcaatgtactcagattcaccccggatggtcgctgggttgta
tctggaggagaggacaacatcgtgaaggtttgggatttaacagctggaaaattattgacc
gagtttaagtgtcatgaaggacagattcaaagcctagattttcatcctcatgaatttctt
ctggcaacaggttcagctgacaggactgtaaagttctgggatcttgaaacattcgagcta
attggttctggtggacctgagacgtctggcgtccgttgcctgagctttaatccagatggg
aagacggtgctttgtggattgcaagaaagcctgaagattttctcgtgggagccaattagg
tgtcatgatggagtggatgttggatggtcaagattgtcagatatgaatgttcacgaggga
aagctgcttggttgctcatacaatcaaaactgtgtaggcgtgtgggttgtagatctctcg
cgcactgagccatgcaatactggagatgctgatcagtcaaatggacaagcagagaaaaag
tctggctcaggaagagattcagtagttctcaatgataataactcaaagactattccaggc
aagctgtctgtttctcagaatgtagatcctttactgaaggaaacaaagtctctcggaaga
ttatctgttactcagaactctgatccttcgacaaaagaaacaaaggccgttggacggtcg
tcaacatcccacagttcggaatcaaagcctctaggaaggttgtcagtttctcaaaattca
gacgttgctaaagagtcaaggacgttatcatctacgggaagtgtacctagcactcctcat
agggtcagtttagccagtgtttcaaaagctgccgtctctaatgctgcaacgtcaaggagg
aattttacaaaagctaacccaaaggggaatcctgttaataaggctgcagattttattcag
gtgtttgtccccagagaagaccctagagtagagcaggcggctgaatccagagcagaactt
gacattattgcaagaacaatgccttattcgttgcaagcggctgattctagaaggtcgcct
agcagcaaaaataaccaagatctgccaaacgctccggttcttgaaatgtccgattctcag
ccagttgaaccaagtgacataccggataaaaatacatttccaagtggcaagggtggcatg
cggggtgcagctgagcggagcatcaacgattttagatacaagagatatggcaggagtaac
tcaaggtcacggatgggttcacctccaagaaaccacgatgaaaactatgacttggtggta
agccacaaatcaagtagagaaccaagtccaactgaaagtcgaaaaggaggaagattccag
acactcgtcataaatagggagagaagaggaagattttccaacttcgagggtcctgtttct
aattttccgagtggaggaaatgcggcggctcctaacatccacccttcaaatatgttcaag
cagagaggaaaccatatgccagttgaacaagggatcgagtctccttctgaagataatatt
gttgaagacataatggggaagcacgatcaatttgtcagctctatgcagtctcgtttggct
aagttacaggtagttcgtagatactgggaaagaaatgatgttaagaacacgataggttcg
atggagaagatggctgataatgctgttaccgcggatgtgctgagtataatcaccgagaga
aatgagattatgacactggatacttgtacctcccttcttcccattctggcagctcttcta
gcaagtgacatggatcagcatttgagcgtttccctggatttgctgcttaagctggttaga
atgtacgggtcaccaatttactcatcactgtccgctccagcatctgttggtgtggatatc
gaagccgagcaaaggattgagcgctacagtcgttgctttgtggagctagagaaagttaaa
gcctgccttccctcgctgtcaagaagaggaggtttggtggccaagtctgtgcttgaactc
aacttagcatttcaggaagtttcatcataa
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