Brassica oleracea (wild cabbage): 106306872
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Entry
106306872 CDS
T04124
Name
(RefSeq) uncharacterized protein LOC106306872
KO
K08331
autophagy-related protein 13
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
106306872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106306872
03029 Mitochondrial biogenesis [BR:
boe03029
]
106306872
Membrane trafficking [BR:
boe04131
]
Autophagy
Autophagosome formation proteins
ULK complex
106306872
Atg1 complex
106306872
Mitochondrial biogenesis [BR:
boe03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
106306872
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Seadorna_VP8
Motif
Other DBs
NCBI-GeneID:
106306872
NCBI-ProteinID:
XP_013602074
UniProt:
A0A0D3ACH6
LinkDB
All DBs
Position
C1:35108624..35111238
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AA seq
592 aa
AA seq
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MNRSSSNSEGAKAEQIIFEFFAKSLHIILESRTPFMSSRNFSGDQMICSPSPSSSSSSSS
SVRPRDKWFNLALRECPAALESFDIGRRSSLEPLVVDVVLVARQPFVGDQMSLSDQDELA
CETKNEQVIERWLVQYDNRKVREASASRSSSSNSKLQVMYKKATLLLRSLFVMVRLLPAY
KIFRALNSSGQICKFKLVPKVPTIVEPFTRREEAEMQKFAFAPVDTVCGRLCMSVLYRSL
SDVSCEHSAPVSPTFITDYVGSPLADPLKRFPSLPLSYGSPPLLAFQRRHSWSFDRFKAS
SPPPSVSCSPSPTRSDSQALVRRLPDIPTGRRKDEERDFSPPCSPSGPVSRGITRTESAP
VRIPAPSFESKQNLVAPSPRLKLLRQASLKPVRNSGGAVESGAGLEKLFLYGREEFRRSS
RVRLSTNSSPRISFSRSSSRSYQEDFDDNDFPCPFDVEYDEITDPSSRSGSFDQRGDIHE
PPLESSGSYPKKSQDAAVGALVNMLKKAPPLRQDVSETSIPEIYWNNNKKPAGAHDVAAA
SMTASGIALAAKTTADALEELRSYKEMKNVLLSQSTMGSSSVTTSPFAVSGS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggagtagcagcaattcagaaggtgctaaagcagagcagatcatattcgagttc
ttcgccaaaagcctccacataatcctcgaatcaaggactcctttcatgtcttcaagaaac
ttcagcggtgaccagatgatctgctccccttccccttcctcctcctcttcatcttcctct
agcgtcaggcctcgcgacaaatggttcaacctagccctcagagaatgccctgcagcctta
gagagtttcgacatcggccgcagaagcagcctcgagcctctggtcgtcgatgtagttctt
gtagcgagacaaccatttgttggtgatcaaatgagtttgtcagatcaagatgagttagcg
tgcgagacaaagaacgagcaagtgatagagaggtggttggtgcagtacgataacagaaag
gttagggaagcttctgcttccaggtcaagtagtagtaacagtaagttgcaagtgatgtat
aagaaagcaactctgcttctgagatcactctttgtgatggttaggctcttacctgcttac
aagatcttccgagcgctcaactcctccggacagatctgcaagtttaagctcgtccctaag
gtccccaccattgtcgagccgttcactcgcagagaagaagcggagatgcagaagttcgct
ttcgctccggttgacaccgtctgcggtaggctttgcatgtcggtgttgtatcgttctctc
tctgacgtgagctgtgaacactcggctcctgtctctccgacgtttataacggattacgtt
gggagtcctttggctgatccgttgaagaggttcccttctctgcctctttcttacggttcg
cctccgttgctggcgtttcagaggcggcatagctggagtttcgataggttcaaggcctcc
tctcctccgccttcggtttcttgctcgccgtctcctacacggtcggattcgcaagcgttg
gttcgtcgccttcctgatatacctactggtcgtaggaaggatgaagagagagatttctcc
cctccttgctctccttcaggacctgtctcgagaggcatcacgcgtactgagagtgctcct
gtgagaatcccggctcctagttttgagtccaagcaaaacttggtggcgccttctcctcgt
ttgaaactgttgagacaagcttctttgaagcctgtgaggaacagtggtggtgctgttgaa
tctggagcaggattggagaagctgtttctttatgggagagaagaatttaggaggagctct
cgagtgaggctatctaccaacagctcaccgaggatatcgttttctcgaagttccagtaga
tcataccaagaagattttgatgataatgacttcccttgcccgtttgatgttgagtatgac
gagattactgatcctagcagcagatcagggtctttcgaccagagaggagatatacatgaa
ccaccactagagtcgagcggctcctacccaaagaagtcacaagatgctgcagttggtgct
cttgtgaatatgctgaagaaagctccgcctcttaggcaagacgtctctgaaacttccata
cctgagatttactggaacaacaacaagaaacctgcaggggctcacgatgtggcagcggcg
tctatgacagcgtcggggattgctctggcggcaaagacaacagcggatgcgttggaagag
ttgaggtcgtacaaggaaatgaagaatgtgttgcttagccaatccacaatgggttcttcc
tcagttactacttcaccctttgctgtttcaggatcttaa
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