Brassica oleracea (wild cabbage): 106306940
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Entry
106306940 CDS
T04124
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00510
N-Glycan biosynthesis
boe00513
Various types of N-glycan biosynthesis
boe01100
Metabolic pathways
boe04141
Protein processing in endoplasmic reticulum
Module
boe_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
106306940
00513 Various types of N-glycan biosynthesis
106306940
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106306940
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Motif
Pfam:
Ribophorin_II
Ribophorin_II_3rd
Ribophorin_II_2nd
Ribophorin_II_C
Motif
Other DBs
NCBI-GeneID:
106306940
NCBI-ProteinID:
XP_013599197
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Position
C7:41932729..41937521
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AA seq
684 aa
AA seq
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MMARCLARFLVSLLALAICNAASVSHPISDSHRSAALDVFVPLDGSYKSLEEAYEALKSL
EILGIDKKSDLSSGTCENVVKVLASPSSALKDVFYALSVNGILKCKTGEDVPKDIVSKLQ
AGAKDAKLLLDFYYSIRGLVLVKEQFSGTDLTLGDAEAIFRSVKALSQSDGRWRYSSNNA
ESSTFAAGLAFETLAGVISLAPSEIDQSLIQTVKTGILKLFDSIQKYDDGTFYFDGSEGP
ISTTASVIRGLTSFAASESTGLNLPGDKIVGLAKFFLGVGIPGDAKDFFNQIDALACLED
NRFSVPLILSLPSTVISLTKKEPLKVKVSTVLGSKAPALSVKLAEALNSKGSSVINNQEL
KFDADSATYFLDSFPKNFDVGKYTFVFEILLDESANEKGYITEAQTKVPIAATGAIGIEN
AEIAVLDSDVGSIESQKKLDLTKDGVVSLSANHLQKLRLSFQLTTPLGLVFKPHQAFLKL
KHESQVEHIFLVKTYGKKAELVLDFLGLVEKLYYLSGKYEIQLTIGDASMENSLLSNIGH
IELDLPERPEKAPLPPLHPTDPYSRYGPKSEISHIFRVPEKLPAKQLSLIFLGLIVLPFI
AFLIGLTRLGVNIKSFPSSVGAATSALLFHGGIGAVLLLYVLFWLKLDLFTTLKALSLLG
VFLLFVGHRTLSNLAAASNKLKSA
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgatggcccgatgtctagcacggttcctagtttctctactcgccttagcaatttgcaat
gctgcttcggtttctcatcccatttcagactctcaccgatccgctgctctcgatgtcttc
gtgccactcgatggatcctacaaaagcttggaggaggcgtatgaagcattgaagagtttg
gagattcttggaatcgataagaagtctgatctaagctcggggacttgtgagaatgtggtt
aaagttcttgcgtcgccttcttctgctctgaaggatgtgttctatgctttgagcgttaat
gggattcttaaatgcaaaactggagaagatgttccgaaggatattgtctctaaacttcaa
gctggcgctaaagatgccaagttattgcttgacttctactattctatcagaggcttggtg
cttgttaaggagcaattttctggaactgatctaactctgggagatgccgaagctattttc
cgttccgtaaaggctctcagccagagtgatggaagatggcgctacagctccaacaatgcg
gaatcaagcacctttgctgctggcttagccttcgaaactcttgctggggtgatttcatta
gcaccttcagagattgaccagtcattgatccagacagtgaagacgggtatcctgaagctt
tttgacagtatccaaaaatatgacgatgggacattttacttcgatggaagtgaaggcccg
atctcaacaactgcatcagtaattagggggctcacgtcatttgcagcttcagagtccaca
ggattgaatcttccaggtgataagatagttgggttggccaagttctttcttggtgttgga
attcctggtgatgctaaagatttcttcaaccaaatagatgcactagcttgtttggaagac
aacaggttctctgttccactcatcttgtctcttccatcaactgtaatttcattgacaaag
aaagagcctctgaaggttaaagttagcactgtactcggttctaaggcaccagctcttagt
gtgaagctcgcagaagctctaaattcaaagggttcttctgtaattaacaaccaggagctg
aagtttgatgcggacagtgcaacgtacttcttggactcctttcccaagaactttgatgtt
ggaaagtatacttttgtctttgagattttgctcgatgagtcggcaaatgaaaaaggttac
ataaccgaagctcaaacaaaagtgcctatagccgccacaggagctattggcattgagaac
gcagaaattgcggtacttgacagtgacgttgggagcattgaatctcagaagaagctagat
ttaactaaagatggagtagtatcattatcagcgaaccatcttcaaaagctacgcctgtca
ttccagttaactactccacttggccttgtgtttaagccacaccaggcatttctcaaactg
aaacatgagtcacaggtcgagcatatctttctcgtgaaaacttatggaaagaaggctgaa
ttagttctagattttcttggattggttgagaagctctactacctctctggtaaatatgag
atccagctaactattggagatgcttctatggagaactctctattgagtaatattggccac
atcgaactagacctaccagaacgtccagagaaggcgcctcttcctcctctacatcctact
gacccttactcaagatatgggccaaaatctgagatatcacacatcttccgtgttcctgaa
aagcttcccgcgaagcagctttcattaattttcttgggtcttatagttctcccattcatc
gccttcctgatcgggctgacacggttgggggtgaacataaagagcttcccatcatcggtt
ggagcggcaacatccgctttgcttttccacggtggaattggagctgttctgcttctatac
gtgctattctggttgaagttggatctgttcacgactctaaaggcactatctttgttggga
gtgtttctgttgttcgttggacacagaacactctctaacctcgcagcagcatcgaacaag
ttgaaatctgcttga
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