Brassica oleracea (wild cabbage): 106307013
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Entry
106307013 CDS
T04124
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106307013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106307013
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106307013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
SET1_RBD
Motif
Other DBs
NCBI-GeneID:
106307013
NCBI-ProteinID:
XP_013599294
UniProt:
A0A0D3DGA2
LinkDB
All DBs
Position
C7:44101491..44103925
Genome browser
AA seq
454 aa
AA seq
DB search
MEQKMESVSDLGKLFIGGISWDTDEERLREYFSKYGDLIESVIMRDRTTGRARGFGFIVF
ADPSVAERVILEKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISSPSQHGGGSNRTKK
IFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKT
FHELNGKMVEVKRAVPKEPSSSSAPLAANRSPLLGGYGGNNYGVVVPNRPSGNNSYFNSF
APGYNSNNIGRFSPIGSGRNAFSNNFGLGLNQELSFDGNTTLGFSRIPGSQYFNNASPNR
YNNSPIGFNRGDSAYNPSNRDLLWGNRTDSSGPGWNLGVSVGNNRGNWGLSDANSYGRSF
GTSSGLSALPFSGSNNNNNTNGFDRSMGEMYRGNSVYSDSTWQQTMPHQSANELDGLSRS
YGFGFDNVASDPSGNASEGYPRSYNVGGNRGIEA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaagatggaatctgtatcggatctggggaagctcttcatcggcgggatatca
tgggacacggacgaagaacggcttcgagagtattttagcaagtacggtgatttgatcgag
tctgtgatcatgcgtgaccgtaccacgggacgtgcacgtggctttggcttcatcgtcttt
gcagatccttctgttgcagagcgagtcatcttggagaaacacatcatcgatggccgcacg
gtggaggcgaagaaagctgtgccacgtgacgaccagcaagtgctgaaacgccacgcgagt
ccaatgcaccttatctcctcacctagccaacacggtggcggcagcaatcgaacaaagaag
atcttcgttggaggtttaccgtctagcatcaccgaagccgagttcaagaactactttgat
cagttcggtacgatcgcagacgttgtggtgatgtacgatcacaacacgcagaggccacgt
ggctttggcttcatcacttttgattcagaggagtctgtcgacatggttcttcacaagacg
ttccacgagctaaacggcaaaatggtcgaggtcaaaagagcagtgcctaaggagccttct
tcctcctcagctcctcttgctgctaaccgaagcccacttcttggtgggtatggtggtaat
aactatggagtagtagtacctaataggccatctggtaataatagctacttcaatagcttt
gctcctggttataatagtaacaacataggtcggtttagtcctattggtagcgggaggaat
gctttctctaataactttggtcttggtttaaatcaagaactgagctttgatggaaacact
actcttgggtttagccgcatccctgggagccaatacttcaataatgcttcaccaaaccgt
tacaacaactctccaataggattcaacagaggcgactctgcttacaacccgagcaataga
gacttgctgtggggaaacagaactgattcttctggtccgggttggaacttgggtgtctct
gttggtaacaacagaggaaactgggggctttctgatgctaatagctatgggagaagcttt
gggacaagttctggactctctgcgttaccattctctggtagtaacaacaacaacaataca
aacggttttgataggtctatgggggaaatgtacagagggaactcggtttacagcgactca
acgtggcagcagacgatgcctcatcagtctgctaatgagttagacggcttgtctcgctct
tacggctttggttttgacaatgtagcctcagacccgtctggcaatgcctctgaaggttat
ccaagaagctacaatgtgggaggaaatagaggtattgaagcatag
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