Brassica oleracea (wild cabbage): 106307031
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Entry
106307031 CDS
T04124
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloropastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
boe03041
]
106307031
Spliceosome [BR:
boe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
106307031
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_3
PPR_long
PPR_1
RPN7
AEP1
HAT_Syf1_CNRKL1_N
Motif
Other DBs
NCBI-GeneID:
106307031
NCBI-ProteinID:
XP_013599319
UniProt:
A0A0D3D3X0
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Position
C7:7420510..7423223
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AA seq
795 aa
AA seq
DB search
MIANRACDFSPPLSTASPSGAFATVTVTVTIPNFYFFSPSLNPNIIPHLPIIRHRSSSSR
RLLRRLSFSRNETQSFPQPFTANSASHRTRTFVEHVAGTKESPNQTIEVYDFGDLESARN
DVRNVATRRVETDVEVREIEDLPEEWRRSKLAWLCKEVPSHKAVTLVRLLNAQKKWVRQE
DATYICVHCTRIRENETGFRVYRWMTQQNWYRFDFGLATKLADFLGKERKFTKCREVFDD
IMNQGRVPSESTFHILVVAYLSSSEEGCFQEACSVYNRMIQLGGYRPRLSLHNSLFRALV
SKQGGPSSDDVRQAEFIFHNVVTTGLEVQKDIYSGLIWLHSCQDEVDIERINYLREEMRK
AGFEESNEVVVSLLRAYAKEGEVEEVERTWLELLGLDCGIPSQAFVYKMEAYAKVGDFAR
ALKIFREMDKHLGGATVSGYHKIIEVVCKINQVELAESLLEEFLETGKKQLLPSYIEIVE
MYFDLGLHEKLEKAFVDCLEKCQPNQTIYNIYLESLVNIGNLEKAGDVFDEMKNNGTINV
NASSCNTVLKGYLDSGNHAKAKKIYELMSLKKYEVESQLMEKLDYILSLVRKEVKKPLSM
KLSKEQREVLLGLLLGGLRVESDKERKSHKIMFEFRGKSQAHLILRQHIHDQFREWLPHS
EDEDIPLEFSSISHSCFGFYADNFWPNGRPEIPKLIHRWLSPQSLAYWYMYSGYRTASGD
VILRLKGSVEGIEKVVKALRAKSMECRVKKKGNVFWIGLQGTNSGLFWKLIEPHVLEDMK
DHLRPAYEAVDHDRD
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgatagctaatagagcttgcgacttctctcccccgctctccaccgcctctccttccgga
gccttcgccaccgtcaccgtcaccgtcaccatcccgaacttctacttcttctctccctcc
ctaaaccccaacatcatcccccatctcccaatcatccgccaccgcagcagctcctcgcgt
cgcttactccgccgtctctccttcagtcgaaacgaaactcagtcctttccacagccattc
actgctaattccgcttctcaccgtaccagaactttcgtcgaacacgttgcaggcactaaa
gaatcaccaaaccaaaccatcgaagtctacgatttcggagatttagagtctgctaggaac
gatgtgaggaacgttgcgactcgtagagtcgagactgatgtggaagtgagagagatagaa
gacttgccggaagagtggcgccgctccaagctagcctggctgtgtaaagaagttccgtcg
cataaagccgtgacgcttgtgaggctcttgaatgctcagaagaaatgggttcgtcaagaa
gacgctacttacatctgtgtccattgcacacggattcgcgagaacgaaacaggattcaga
gtgtatagatggatgacgcagcagaattggtaccggtttgatttcggtttagccacaaag
ctagctgatttcttagggaaagagaggaagttcacgaaatgtcgagaggtgttcgatgat
attatgaatcaaggacgtgttccaagcgaatccacgtttcacattcttgtagttgcttat
ctaagtagctcagaggaaggttgtttccaagaagcgtgtagtgtttacaatagaatgatt
caacttggaggttacagaccgcgtcttagtctgcataactctttgtttagagctttggtt
agcaaacagggagggccttcgagtgatgacgttaggcaagctgagtttatcttccataac
gttgtgacgaccgggcttgaggtgcagaaagatatctatagcgggctaatctggctgcat
agttgtcaagacgaagttgacatagagaggataaactatctaagagaagagatgaggaag
gccggttttgaggagagtaacgaagttgtggtttcgttactcagagcgtatgctaaggaa
ggagaagtggaagaagttgagaggacatggcttgaattgcttggtttggattgcggtata
ccttctcaagcgtttgtgtacaaaatggaagcttacgcaaaagtaggcgatttcgcgaga
gctttgaagatatttagggaaatggataagcatttaggtggtgcaacagtttctggatac
cacaagatcattgaagtcgtatgtaaaataaatcaagtggaacttgcggaatctctcttg
gaagagtttttagaaaccgggaagaagcagcttctaccttcatatatagagatagtcgaa
atgtactttgatttgggtttacatgagaaactggagaaggcttttgttgactgcttggag
aaatgtcaacctaaccagactatatataacatatacttggagtcattggttaatataggc
aaccttgagaaagcaggggacgttttcgatgaaatgaagaacaacgggacaatcaatgtg
aatgctagttcctgcaacaccgttttgaaaggatacttggattctggaaatcatgcgaag
gcaaagaagatatatgagctgatgagtttgaagaagtacgaagtcgagtcacagcttatg
gaaaagcttgattacatccttagcttggtgagaaaagaagtgaagaaaccgttgagcatg
aaactaagtaaagaacagcgagaggtattgttgggtttgctgttaggtggtttgcgagtg
gaatcagacaaagagaggaagagtcacaagatcatgtttgaattcagagggaagtctcaa
gctcatctgatactgagacaacacatacatgatcagttccgtgagtggttgcctcattcc
gaagacgaggatataccattagaattctcctccatttctcattcatgctttgggttttac
gctgataacttctggccaaatggtcgacctgagattcccaaactgattcaccggtggctc
tcgcctcagtcactggcttattggtatatgtacagtggatatagaacagcctcgggagat
gttatcttgaggttgaagggaagtgtagaaggtatcgagaaggttgtgaaggctctgaga
gctaaatctatggaatgtagggttaagaagaaaggaaacgttttctggattggacttcag
ggaacaaactcgggtttgttctggaagctaatagagcctcacgtcttagaggacatgaaa
gatcatctaagacccgcttatgaagcagtggaccatgatagggactaa
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