Brassica oleracea (wild cabbage): 106307095
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Entry
106307095 CDS
T04124
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
boe03041
]
106307095
03036 Chromosome and associated proteins [BR:
boe03036
]
106307095
Spliceosome [BR:
boe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
106307095
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
106307095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
RRM_1
TPR_14
HAT_Syf1_CNRKL1_C
Lsm_interact
ARM_TT21_5th
UTP6_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
106307095
NCBI-ProteinID:
XP_013599417
LinkDB
All DBs
Position
C1:complement(11554867..11585049)
Genome browser
AA seq
818 aa
AA seq
DB search
MDDSELLVSSDQKMEDASTVNPIPPSSDDSGESDSESEDEAESNHQIETLESELSANPYN
YDAYVQYIKLLRKTANLEKLRQAREAMSAMFPLSPSLWLEWARDEASLASSDNVPEIVKL
YERGISDYQSVSLWCDYLNFLREFDPSVNGYTPDGISKMRNLFERAIPAAGFHVTQGNRI
WEGYREFEQGILDTIDKADLEERNKQIQRIRSIFHRHLSVPLKDLSSTLITYKAWELEQG
TDLDIGSDDLSKVSPQVAVANKKAQQMYSERAHLEENISKKDLSDTEKFQHFMSYIKFEQ
TSGDPTRVQAIYERAVAEFPVSSDLWIDYTSYLDKTLKVGKAITHAYSRATRSCPWTGDL
WTRYLLALERGSASENDIYAVFEKSLQCTFSSFEEYLELYLTRVDGLRRRMISTSMVETL
DYSLIRETFQQASDYLTPQMQNTDSLVRLHAYWANLELNIGKDLAGARGVWDSFLKKSGG
MLAAWQAYIDMEVRLGHVKEARSIYRRCYTRKFDGTGSEDICHGWLRFERERGALEDFDH
AVQKVTPRLEELQLIRLQQESAPVKPSAGVKEHNPQKSTREKRKAGPNVEEESSAKRQKS
KGQKMNDEEAEGKTATVPNKKSKSETEKAADSKREESEGAKPVKPKIFTDECTAFLSNLS
PKAQEEDIRKFFSDVGGVASIRILHDKGTGKPRGLAYVDFVDDEHLAAAIAKNRKMLLGK
KISIARSNPKKGKKDFTRRGNEGSGNSKDTSQVSDKAKAPLDGETEGEKRGNEVEVRGKN
TFAIPRTVKALGFTTPKPIAADETPKSHDEFRNMFLKK
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagtgagctactcgttagcagcgatcagaagatggaagacgcttcaaccgta
aaccctatcccaccctcgtcggatgattccggcgagtccgattccgaatcggaggatgag
gccgagtctaatcaccagattgaaaccctagagtcggagctctccgccaatccttacaac
tacgatgcttatgtccaatatataaagcttctaaggaaaactgcgaaccttgagaagcta
agacaagcaagggaagctatgagtgctatgtttccgttgagtccttctttgtggcttgaa
tgggcgagggatgaagcttctctagcctctagtgataatgtgcctgaaattgtgaagctt
tacgaacgagggatttctgattatcagtctgtgtctctttggtgtgactacctgaacttt
ttgcgagagtttgatccgtccgttaatgggtatacacctgatggtatctcaaaaatgagg
aatctttttgaacgtgctattccggctgcgggattccatgttactcaaggcaatagaata
tgggaaggatatagagagtttgagcaaggcatcttagacactattgacaaggctgacctt
gaggagaggaataaacagatacaaaggattcgaagcatatttcaccgtcacctgtctgtt
ccgctgaaagatttaagctccacccttattacatataaggcttgggagttggaacagggc
actgaccttgatattggatctgatgatttgagtaaggtttctccccaggttgctgttgca
aacaagaaggcacaacagatgtatagtgaacgtgcccatcttgaagagaacatatctaag
aaagatttatcggacacggaaaagtttcagcatttcatgagttacattaagtttgagcag
acgtctggagatcctacccgagttcaagctatatacgaacgcgctgtggctgaattcccg
gtttcaagtgacttgtggatagactacaccagctatcttgataaaactttgaaggttgga
aaagctataacgcatgcttattctagggcgactagaagttgcccttggactggagatctt
tggactcgttatttgcttgctttagagcgtggttctgcatccgaaaacgatatttatgct
gtctttgagaagtcattgcagtgcaccttttcctcttttgaggagtacctggaattatac
ctcactcgagtagatggcctgagaaggagaatgatttcaacctcgatggtagagactttg
gattattctctgataagagaaacttttcagcaagcatcagactatctaacgccccagatg
caaaatacagacagtttggtgcgtttgcatgcttattgggccaacttggaactgaatatt
ggaaaagatctagctggagcaagaggtgtttgggatagctttctgaaaaagagtggtggg
atgctagcagcctggcaggcatacattgatatggaagtgcgcttggggcacgtaaaggaa
gctaggtctatttaccggaggtgctatacaagaaagtttgatgggactggctcagaagat
atatgccatggatggttacgctttgaaagggagcgtggagctttggaagattttgaccat
gccgttcaaaaggtaacaccccgcttggaagagctacaactgataaggctacaacaagag
tctgcacctgtcaaaccgtcagccggcgtaaaagagcataacccacaaaagagtacacgt
gaaaagagaaaagctggaccgaatgtagaagaagagtcttctgctaagcggcaaaagagt
aaaggtcaaaagatgaatgacgaggaagcagaaggtaagactgcaactgtaccaaacaaa
aaaagtaagtcagagactgaaaaagcagctgattcaaagagagaagagtcagaaggcgct
aaaccagtgaagccgaaaatcttcacagacgagtgtacagcttttctttcaaatctcagt
cctaaggcgcaagaggaagatatacgcaagttctttagcgatgttggtggtgttgcttcc
attcgcattctccatgacaaaggcactggaaaaccaaggggactggcatacgttgacttt
gtggatgatgagcaccttgcagcagctatagcaaaaaacagaaagatgttacttggtaag
aagatcagtatagcacggtcaaatccaaagaagggtaaaaaagatttcactcggcgtgga
aatgaaggttcggggaattcaaaggacacatcccaggtttctgacaaggcgaaagcacct
cttgatggcgaaacagagggtgaaaagcgaggaaatgaagtggaggtgaggggtaagaac
acgttcgccatcccacgaactgttaaagcactcggcttcacgacacccaaacccatcgca
gcagatgagacgccaaaatcacatgacgagttcaggaatatgttccttaaaaagtaa
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