Brassica oleracea (wild cabbage): 106307135
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Entry
106307135 CDS
T04124
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00906
Carotenoid biosynthesis
boe01100
Metabolic pathways
boe01110
Biosynthesis of secondary metabolites
Module
boe_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
106307135
Enzymes [BR:
boe01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
106307135
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Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
HI0933_like
Thi4
GDI
GIDA
Pyr_redox_2
GMC_oxred_N
DUF7557
Motif
Other DBs
NCBI-GeneID:
106307135
NCBI-ProteinID:
XP_013599462
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Position
C8:40308715..40311962
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AA seq
590 aa
AA seq
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MNLCLRNPVTCADRSSSLFSALKTSNYKLGTSKFGFLKHHKKNHVVTVRSVSSTAVVEER
TKRESGGGESKVYDAIVIGSGIGGLVAATQLAVKEAKVLVLEKYLIPGGSSGYYERDGYT
FDVGSSVMFGFSDKGNLNLITQALKAVGREMEVIPDPTTVHFHLPSHLSVQVHREYDEFV
NELISKFPHEKEGILGFYGVCWKIFNSLNSLELKSLEEPIYLFGQFFQKPLECLTLAYYL
PQNAGDIARKYIKDPQLLSFIDAECFIVSTVNALQTPMINASMVLCDRHYGGINYPVGGV
GGIAKSLAEGLVDQGSEILYKANVKSIILDDGKAVGVRLADGREFFAKTIISNATRWDTF
GKLLKGEKLPKEEENFQKVYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWKNLEEPY
GSIFLSIPTILDPSLAPDGRHILHIFTTSSIEDWEGLTPKEYEAKKEEVAAGIIQRLEKK
LFPGLSSSITFKEVGTPRTHRRYLARDKGTYGPMPRGTPKGLLGMPFNTTAIDGLYCVGD
SCFPGQGVIAVAFSGVMCAHRVAADIGLERKSKVLDAGLLGLLGWLRTLA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaatctctgtctccgcaaccccgtaacgtgtgctgatcgcagctcctccttgttctcg
gccttgaagacttcaaattacaagctgggtacttcaaagtttgggtttttaaagcatcat
aagaagaatcatgtggttacagtaagatctgtttcttccactgctgtagtagaagaaagg
acgaagagagaaagtggaggaggagagagtaaagtgtacgacgcaatcgtcatcgggtct
gggataggaggcttagttgcggcgactcagctagctgttaaagaagctaaagttctagtt
ttggagaagtatctcatccctggtgggagctctggttattacgaaagagatgggtacaca
ttcgatgtgggttcctctgtcatgtttggtttcagcgataaggggaatctaaacttgata
actcaggcgttgaaggcagttggtcgtgagatggaagttatacccgatcccaccactgtt
catttccatctccccagtcatctctctgttcaggttcatagagagtatgatgagttcgtt
aatgagcttattagcaagtttcctcacgagaaggaagggattcttggattctatggcgtc
tgctggaagatcttcaactcattgaactccctggaactgaagtcacttgaagagcctatc
tacctttttggacagttctttcagaagccgcttgaatgtttgacacttgcttattacttg
cctcaaaatgctggggatatagctaggaagtacataaaggatcctcagttactgtctttc
attgacgcagagtgtttcattgtgagcacagtcaatgctttgcagacgccaatgatcaat
gcaagtatggttttatgtgacaggcactatggaggaattaactaccctgttggtggtgtt
ggtggaattgccaagtcgttagcagaaggacttgttgatcaaggcagtgaaattctctac
aaagctaatgtgaaaagcatcatacttgatgatggaaaggctgttggtgtaaggctagca
gatggaagagaattcttcgctaaaacgataatctctaatgctacaagatgggatacgttt
gggaagctgttgaaaggagaaaagcttccaaaggaagaagaaaacttccagaaagtgtat
gtgaaggctccatcatttctctcaatccatatgggtgttaaagcagaggttctccctcca
gatacagattgccatcatttcgtacttgaggatgattggaagaatctggaggagccttat
ggcagtatcttcctcagcattccaactattcttgatccatctttggctccagatggtcga
catatactgcacatatttacaacctcttccatcgaagattgggagggactcactccaaaa
gagtatgaagcgaaaaaagaagaggtggcagctggaatcatacagaggctagagaaaaaa
ctgtttcctggtctcagttcatccattacttttaaggaggtgggcacaccaagaacacac
aggcgatatcttgctcgggacaagggaacgtatggaccaatgccaagaggaacaccaaaa
ggtttactaggcatgccgtttaacacaactgcaatagatggtttgtactgcgttggggat
agttgttttcctggtcagggagttatagctgtggctttctcaggagtgatgtgtgctcat
cgtgtagctgctgacattgggcttgagagaaaatcaaaggtacttgatgctggtcttctt
ggtttacttggttggttaaggacactcgcatag
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