Brassica oleracea (wild cabbage): 106307156
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Entry
106307156 CDS
T04124
Name
(RefSeq) oligouridylate-binding protein 1B
KO
K13201
nucleolysin TIA-1/TIAR
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106307156
03041 Spliceosome [BR:
boe03041
]
106307156
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
106307156
Spliceosome [BR:
boe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
106307156
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
106307156
NCBI-ProteinID:
XP_013599485
UniProt:
A0A0D3DWU0
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All DBs
Position
C8:36830766..36833964
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AA seq
418 aa
AA seq
DB search
MQRLKQQQQQQAMMQQALMQQQSLYHPGLLTAPQIEPIPSGNLPPGFDPTSCRSVYVGNV
HIQVTEPLLQEVFASTGPVESCKLIRKEQSSYGFVHYFDRRSAGLAILSLNGRHLFGQPI
KVNWAYASGQREDTSAHFNIFVGDLSPEVTDAMLFSCFSVYPSCSDARVMWDQKTGRSRG
FGFVSFRNQQDAQTAIDEAGGKWLGTRQIRCNWATKGATSGEDKMSSDSKSVVELTSGVS
EDGKDASNGDAPENNAQYTTVYVGNLGPEVSQVDLHRHFYSLGAGVIEEVRIQRDKGFGF
VRYSTHVEAALAIQLGNTHSYLGGRQMKCSWGSKPTPPGTASNPLPPPGPAPIPGFSASD
LLAYERQLAMSKMAGMNPMMHHPQGQHALKQAAMGATGSNQAIYDGGFQNAQQLMYYQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcagagattgaagcagcagcagcaacaacaagcgatgatgcagcaagctttgatgcag
caacagtctctctaccatcccggactcctcaccgctcctcagatagaaccaatcccaagt
ggaaatcttccccctggttttgatccaacttcttgccgcagtgtgtacgttggaaatgtc
catattcaggtgacggaacctctgctccaagaggtttttgccagcactggtcctgtggaa
agctgtaagcttattaggaaagaacagtcttcctatggttttgtccactactttgatcga
cgatcagctggtctggctatcctctctctcaatggaaggcatttgtttgggcaacctatc
aaagtgaactgggcttatgctagtggccagagggaggatacatcagctcactttaatata
tttgttggagatttgagcccggaggttactgatgcaatgctgtttagttgcttctctgtc
tacccaagttgctcggatgcaagggttatgtgggatcagaaaactgggcgttcaagagga
tttggttttgtttctttccgaaaccagcaggatgcccagactgcaatagatgaagcaggc
gggaaatggcttggtaccaggcagattcgctgcaactgggctacaaagggagccacttct
ggtgaagacaagatgagctcggattccaaaagtgttgtggaactaaccagtggtgtctcc
gaggatggcaaagatgcaagtaacggtgatgctccagagaacaatgctcagtacacaact
gtctacgttgggaatcttggtccagaggtttctcaggttgatcttcaccgccacttctat
tctcttggcgctggagttattgaggaggttcgtattcaaagagacaaaggttttggattt
gtaagatactctactcatgtagaggctgccctcgctatccagctgggaaacacacattcc
tacctcggtggcaggcagatgaagtgttcttggggaagcaagccaactccaccaggaaca
gcatcgaacccgcttcctccaccaggtcccgcaccaatccctggattctcagccagcgac
ctcttggcttacgagaggcaactagccatgagcaagatggcgggaatgaatccgatgatg
catcacccgcagggacaacacgctctcaagcaagctgcgatgggagccactggttcaaac
caggccatctatgacggtggtttccagaacgcgcagcagctcatgtattaccagtga
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