Brassica oleracea (wild cabbage): 106307230
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Entry
106307230 CDS
T04124
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03015
mRNA surveillance pathway
boe04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106307230
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106307230
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
boe01009
]
106307230
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106307230
03036 Chromosome and associated proteins [BR:
boe03036
]
106307230
Protein phosphatases and associated proteins [BR:
boe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
106307230
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
106307230
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
106307230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_WDR3_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
106307230
NCBI-ProteinID:
XP_013599580
LinkDB
All DBs
Position
C8:36710219..36714215
Genome browser
AA seq
495 aa
AA seq
DB search
MNGAASSAGSPLEWRFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFE
RTDTKDHGGSRRDAEQMDYAAKHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQPA
NGALFLLSTNDKTIKYWKVQEKKIKKISEMNIDPSKALGDNRPSPSSPPQLLANGVHDYL
SKDFSFPPGGIPSLRLPMVVTSQETSLVARCRRVYAHAHDYHINSISNSSDGETFISADD
LRVNLWNLEISNQSFNIVDVKPTNMEDLTEVITSAEFHPIHCNMLAYSSSKGSIRLIDMR
QSALCDSHTKLFEEPEAPGSRSFFTEIIASISDIKFSRDGRYILSRDYMTLKLWDINMDS
GPVASYQVHEHLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFRVFGASKGSTE
AATLEASKNPTRRQIQTPARPSRSMTSMIRRGSESPGAENGNANDFTNKLLHMAWHPTEN
SIACAAANSLYMYYA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtgccgcttcctccgccggttctcctctagagtggagattctctcaggtcttc
ggcgagcgaaccgccggtgaagaagtccaggaagttgacatcatttcagccattgagttt
gataaaagtggagaccatcttgcaactggtgaccgtgggggccgagttgttctttttgag
aggactgatactaaagatcatggtggatccaggagggatgctgagcagatggattacgca
gctaagcatcctgagtttcgatataaaacagagtttcagagtcatgaaccagagtttgac
tatctcaagagtttggaaatagaggagaaaatcaacaaaatcagatggtgccagccagca
aatggtgcattgtttctgctttccacaaatgataaaaccatcaaatactggaaggtacaa
gagaagaagatcaagaaaatttctgaaatgaatattgatccgtcgaaagctttaggagac
aatcgaccaagtccaagtagccctcctcaattacttgctaatggagtacatgactacctc
agcaaggacttctcttttccgccaggaggcattccatctctgcgtttgcctatggtagtg
actagtcaggagaccagccttgtggccaggtgccgaagagtgtatgctcatgctcatgat
taccatattaattcaatctcaaatagcagcgatggagaaaccttcatttctgctgatgat
ctgcgagtaaatctctggaatttggagatcagcaaccagagtttcaatattgttgatgtt
aagcccacaaacatggaggacttaactgaggttattacatcagccgagtttcatccaatc
cattgtaatatgctcgcatatagcagttcaaaaggctccatccgtttgattgatatgagg
caatcagctctgtgtgattctcacacgaaattgtttgaagaaccggaagcacctggttca
agatcatttttcacagagataattgcctcgatttcagatattaaattctcaagggatggg
agatacatacttagtcgcgattacatgacccttaagctgtgggacataaacatggattct
ggcccagttgcatcttaccaggttcatgaacatctgagacccaagctatgcgatctatat
gaaaatgactccatctttgataaatttgagtgttgtctcagtggcgatggattgagggta
gcaacaggctcttacagcaatctattccgtgtatttggagcgtctaaaggaagtactgaa
gctgcaactttggaagctagcaaaaaccctacgaggaggcaaatccagacacctgcaaga
ccttccagatctatgaccagtatgattagacgaggatcagagagtcccggagctgagaat
gggaacgcaaatgattttacaaataagttgctgcatatggcttggcatccaacagagaac
tcaattgcttgtgcagcagcaaacagcttgtacatgtactatgcatga
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