Brassica oleracea (wild cabbage): 106307413
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Entry
106307413 CDS
T04124
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 19-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
boe01002
]
106307413
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106307413
Enzymes [BR:
boe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106307413
Peptidases and inhibitors [BR:
boe01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106307413
Ubiquitin system [BR:
boe04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106307413
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Glyco_hydro_120_ins
Motif
Other DBs
NCBI-GeneID:
106307413
NCBI-ProteinID:
XP_013599821
UniProt:
A0A0D3DVL3
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All DBs
Position
C8:34400273..34404014
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AA seq
651 aa
AA seq
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MHEVGSTWDLNFFTQLVLTLLFLSLGLLFFVKRTAANYFEVGGAPGGFHRRNFMVPPDAA
ECSVCGKLSTKKCSRCKSVRYCSAECQKSDWNSGHKLQCKVFKSSGSSPVRKDDLDFKAS
LFGNRTVSKTALSPKLSQSKAVVVKPGDVLFPYETFVNYFNWDKPTLAPCGLTNCGNSCF
ANVVLQCLSWTRPLVAYLLERGHKRECRRNDWCFFCEFETHLERANMSRFPFSPMNIISR
LPNIGGNLGHGRQEDAHELMRFVIDMMQSVCLDEFGGEKAVPPRAQETTLIQHIFGGLLQ
SQVKCTVCSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQGDNLYKCDRCNDYV
KACKRLSIRSAPNILTIALKRFQGGRFGKLNKRIGFPETFDLGPYTSGGGEGSDVYNLYA
VIVHLDMLNASFFGHYICYVKDLRGDWYRIDDSEVEKVELEDVLSQRAYMLLYSRVQTRP
SSLRPEEVQDEKKTDTLNIESSQDGSVESSGVGANVSSLCNGISISHSEGSSSSSLSSSV
SVSEKEGEVAERVDTVDSESNPSIDMEHDSGTDNQEGEVVNGKENPTVEEPAIDSSCSDN
NASSPSAATENSTVEDPACSDITTSSPSAAIESNHQEEKEGSDTKMIDDAQ
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaagtaggatcaacgtgggatctcaatttcttcacgcagctcgtattgactctc
ctcttcctctccctcggtctcctcttcttcgtcaaacgaacggcggccaactacttcgag
gtcggcggcgcccccggtggtttccaccgccgaaatttcatggttccccccgacgcggct
gaatgctccgtctgtgggaagctctccaccaagaagtgctctcgttgcaaatccgttcga
tactgctctgcggagtgccaaaagtcagactggaactcggggcataaactacaatgcaag
gtgtttaagagctctggctcatcacctgtgagaaaggatgatctcgatttcaaagcttct
ctctttgggaataggactgtgtctaagactgcattgtctcctaagctgagccaaagcaaa
gctgttgtcgtcaagccaggagatgttcttttcccatacgagacttttgttaactatttc
aactgggacaaacctacattggctccttgtgggctcaccaattgtggaaacagttgtttc
gctaatgtggttctacaatgcctttcatggacacgccctcttgttgcctacctactggag
agaggccacaagagagaatgtaggcgcaatgattggtgcttcttctgtgagtttgaaacc
catctcgaaagagcaaacatgagccggttcccgttttcaccaatgaacattatctcgcgg
ttgcctaacattggtgggaatcttgggcatgggagacaggaagacgctcatgagttgatg
aggtttgtaattgacatgatgcaatctgtttgcctcgacgagtttggtggagagaaagcg
gtgcctcctcgtgcccaagaaacaacacttattcaacacatttttggcggtctccttcag
tcacaggtcaagtgtactgtttgcagtaatgtttctgaccaatacgaaaatatgatggat
ttaacggttgagatccacggggatgcggtatcattggaggaatgtctcgatcagttcact
gctaaagaatggcttcagggagataacctttacaaatgtgatagatgtaatgactatgtg
aaggcatgtaagcgcctttcaattcgttctgctcctaatattctcacaattgccttgaaa
agattccagggtgggaggtttggtaaactgaacaaaagaattggttttccggagacattt
gatctcggcccttacacgagcggtggaggagaaggatcagatgtgtacaatctttacgct
gtgattgtccatttagatatgttgaatgcctcatttttcggccactacatttgctacgtt
aaggacttgcgaggagactggtatagaatagacgattctgaggtggaaaaagtcgaacta
gaggatgtcctttctcaacgagcatacatgctcctctacagcagggttcagactagaccg
tcaagccttagacccgaagaagttcaagatgagaagaaaacagatacattaaacatagaa
tctagccaagatggatctgttgagagttctggggtgggtgcaaatgtgtcctcgctgtgt
aacggcatctccatctcacattcagaaggatcatcatcatcatctttgtcatcatcagta
agtgtctctgaaaaagaaggggaagttgccgagagggtggatacggtagattccgagtca
aatccttctattgacatggaacatgattctggaacagataatcaagaaggagaagtagta
aatgggaaagagaatccaacggttgaagaaccggctattgattcttcttgttcggacaat
aatgcttcatccccatctgctgccacagaaaattcaacggttgaagatcctgcttgttcg
gacattactacttcatctccatctgctgctatagagtccaatcaccaggaggagaaagaa
ggttcagacaccaagatgattgatgatgctcagtga
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