Brassica oleracea (wild cabbage): 106307436
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Entry
106307436 CDS
T04124
Name
(RefSeq) H/ACA ribonucleoprotein complex non-core subunit NAF1-like
KO
K14763
H/ACA ribonucleoprotein complex non-core subunit NAF1
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
boe03009
]
106307436
Ribosome biogenesis [BR:
boe03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
106307436
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Gar1
SR-25
BUD22
Motif
Other DBs
NCBI-GeneID:
106307436
NCBI-ProteinID:
XP_013599851
UniProt:
A0A0D3DIP1
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Position
C8:complement(305957..308529)
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AA seq
668 aa
AA seq
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MSGFAVKPGLKEEEELPVVEAIKDFPPIDSYLDFDSSNWLGSNNSNIEEEFSLEDTDFDF
FEEHMEIGQEGVTVSEETRTLVSESIEVTSKLCCGVSGVSSISSESVIDVKPLLCGGMSA
NFGGVAEPAVKESEPVVSKVSRPMEDDKGETSSAESESETSSSSSSSSASSSIDEEESNK
EKKFEDQMVMGKEDDMAEELEEGEIRSVDEEHEAEEDDVNEMVAWSNDEDEDLGWQTNEP
IRINNELKELPPVPPVDVTLEPHHVMLPVGVVLSVLSTPLTQVIVEGMEKHSPLAEGSIL
WISERRTPLGLVDEIFAQVECPYYSVRFNSENEVPEGVSEGTPVSFVAEYAQHILNIKEL
QKKGYDASGDNDEEVAEELEFSDDEKEAEYIKMQKMEKRGMMDDQKDGNARNKKKKNNDL
GTSTSNDSGEWTENRGFSSLSSNRSDPQMGDPVSNHQPRPQMVGFPPNGGGWRPQSNQQN
SHQFPPMPSQIAIPNLPPPMQRPMMAMQNQMMFRPQFNGAQLPMPAGPGGLNFFQGQATA
PWPALVGQNCFNQQPFGMGRGIQPPQLLNELIVNLLASQGLQMLNNRPQSPMNPQLQMQP
QFPMNPQFQMAEQQATVSNEPTVPNATAVSNEPSVPDAEQQQATVSNEPTFPNATAVSYE
PSVPNAEQ
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgtctggatttgccgttaaacccggccttaaggaagaagaggagctacctgttgttgaa
gctatcaaggatttccctcccattgattcctatctggatttcgattcctccaactggttg
gggagtaataactcgaatattgaggaggagtttagcttagaggatacggactttgatttc
ttcgaggaacacatggagattggtcaagaaggtgttactgttagcgaggaaacgcgtacg
cttgtgtctgagtccattgaggtaacgtccaagctttgttgtggagtttctggagtgagc
tcgattagttctgagtcggtgattgatgtaaagcctctgctttgtggtggcatgtctgca
aattttggcggggtagctgaaccagctgtgaaagagtcagaacctgttgtttctaaggtc
tctaggccaatggaagatgacaagggggaaactagttctgctgagtctgagagcgaaacc
tccagctcttcttccagctctagtgctagtagtagcattgatgaggaagaaagtaataag
gaaaagaagtttgaagatcagatggtgatggggaaagaggatgatatggcagaagaactt
gaagagggtgagatacggagtgtagatgaggagcatgaggctgaagaagatgatgtgaat
gagatggttgcttggagcaatgatgaggatgaggaccttggttggcaaacaaatgaacct
ataaggataaataatgagctcaaggagcttcctccagttccacctgtggatgtcactttg
gaaccacatcatgtcatgcttcctgttggagttgttctttcggtactgagcacaccactg
acacaagtaatagtggagggaatggaaaagcatagtcctttggccgaaggttctatccta
tggataagtgaaagaagaacgccattgggactggtggatgagatctttgcacaagttgag
tgcccttactatagtgtgaggttcaattcagaaaacgaagtgccggagggggttagtgaa
ggtacacctgtctcattcgttgctgagtacgctcagcatattctcaatatcaaggaactg
cagaagaaaggttacgatgcatcaggagataacgacgaggaggtagcagaggagcttgag
ttctcagatgatgagaaagaagccgaatacataaaaatgcagaagatggaaaagagaggg
atgatggatgaccaaaaagatggtaacgcaagaaacaagaagaagaaaaacaatgatctc
ggaacgtctacaagcaatgactcaggggaatggacagagaaccgtgggtttagttcttta
tcctccaaccgttctgatcctcaaatgggtgatccggtttcgaaccatcagccacgacct
cagatggtgggttttcctccaaacggtggaggatggagaccccagagtaatcagcagaac
tcacatcagtttcctcctatgcctagtcagattgcaattcccaatctaccaccaccaatg
cagagacctatgatggcaatgcaaaatcaaatgatgttccgaccacagttcaatggtgcc
cagttgccaatgcctgctggaccgggtggcttaaatttttttcaaggacaggctacagcg
ccatggcctgcattagttggtcagaactgtttcaaccaacagccgtttgggatgggtcgt
ggtattcagccaccgcagttactgaatgagctgattgttaatctgttggcttctcaaggt
cttcaaatgctgaacaacagaccacagtctccaatgaacccacagttgcaaatgcaaccg
cagtttcctatgaaccctcagttccaaatggctgaacaacaggccacagtctccaatgaa
cccacggtgccaaatgcaaccgcagtttccaatgaaccctcagttccagatgctgaacaa
caacaggccacagtctccaatgaacccacatttccaaatgcaaccgcagtttcctatgaa
ccctcagttccaaatgctgaacaataa
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