Brassica oleracea (wild cabbage): 106307657
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Entry
106307657 CDS
T04124
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase 1
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106307657
Enzymes [BR:
boe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106307657
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106307657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-RING_5
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4
zf-ANAPC11
zf-RING_16
zf_RING_Vps8_fungal
DUF2921
zf-RING_UBOX
zf_RING_Vps8
Prok-RING_4
zf-RING_Vps41
PHD_NSD
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
106307657
NCBI-ProteinID:
XP_013600127
UniProt:
A0A0D3DNA9
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Position
C8:17904628..17908447
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AA seq
565 aa
AA seq
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MKKRQHLGVLGLGFVEFQIIFCLSIWLAFPQQATGLRPIREKARTWSDEWLFGRKQVSEG
GRFSAWNITGTYRGNWKFLDSLNSSSKFQDFQKSNGNSVVELVAVPTKITGVHYVQGVVL
FHDVFDNEQNLGGAQISLEGVYIWPFRQLRLVANSGKESDSGQDENNLLSNPYHLLGIFS
SQVFQESTRDRILQRKISARNEMDKHCNIEIAAQISRVASSDNNGDKSYYHMEGLMESPG
VGDDGDCFSPLFLNATSVNVEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHGNTQSGAAK
VSIVMIGHQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKAT
RPSNSGEGWETMRRELSFLYSRFYGILLGGILIMYELHNYMRPILLLMYSFWIPQIVTNV
IRDSRKPLHPYYIVGMTATRLAIPLYVFGCPHNFMRVVPSKAWCVCLCAFMGLQAVILLL
QHYFGSRCFVPRQMLPEKYNYHRRFNQDVSRNTDCVICMTAINLRQRTSDFMVTPCEHFF
HTGCLQRWMDIKMECPTCRRSLPPA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcgtcaacatttgggggttttgggattagggttcgtcgaatttcagatcatt
ttctgcttatcgatttggttggcgtttccgcagcaagctacggggcttagacccattagg
gagaaagctcgaacctggagcgacgagtggctctttggtagaaaacaagtatctgaagga
ggaaggttttccgcatggaacataacaggaacatatagagggaattggaagtttctggat
tcattaaatagctcttcgaagttccaagacttccagaaatcaaatggtaattctgtggtt
gagttagtggctgttccaacaaagataaccggtgtgcattatgttcagggtgtagtttta
ttccatgacgtatttgacaatgaacaaaatttgggtggtgcccaaataagtctggaaggt
gtatatatatggccctttagacaactccgccttgtggctaacagtggcaaggagagtgat
tcagggcaagatgagaataatcttctctcaaatccctatcatctgctcggaatcttttcc
tctcaagtgtttcaagaatctacaagagacagaatactgcaacggaagatttcggcgaga
aatgagatggataagcactgtaacatcgaaatagcagctcagatatcccgtgttgcttct
agtgacaacaatggagacaaaagttattatcacatggaaggattgatggaaagtcctggg
gtaggcgatgacggagattgtttctcgcctttgttcctgaatgcaacttctgtgaatgtc
gaagtctactacaacaaagctgtgaactatacactgatggtcacttttgtctctttcctc
caggttcttttgttgatccggcaaatggagcacggtaacacacaatctggtgctgccaag
gtatccattgtaatgatcggacatcaagcaatcatggatgcttacttatgccttttacat
ctcactgctgggatattagttgaatctctatttaatgcatttgcaaccgccgcgttcttc
aaattcgtagtcttttcgatttttgagatgagatatcttctggccatatggaaagcaacc
aggccttccaacagcggagaaggttgggaaacaatgaggcgtgaactctcctttctctac
agccgattctatgggatccttcttggagggatattgataatgtacgagttgcacaactac
atgcggccgattcttcttctcatgtactcgttttggataccacagatagtcaccaacgtc
atccgggattcaagaaagcctctgcacccgtattacatcgtgggcatgactgccacacgg
ttagctataccgttatatgtttttggatgcccacacaacttcatgcgtgtagtgcctagc
aaggcctggtgcgtgtgcttgtgcgcattcatggggttgcaagctgtcattcttcttctt
cagcactactttggttcacgctgctttgttccccgtcagatgctgccagagaaatacaac
taccacaggagatttaatcaggacgtaagccgcaacactgattgtgtcatctgcatgacc
gctatcaatctcagacagcgtactagtgatttcatggtaactccatgtgaacatttcttc
cacacgggatgcttacagagatggatggatataaagatggagtgcccgacttgtaggcgt
tccctgcctccagcttag
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