KEGG   Brassica oleracea (wild cabbage): 106307746
Entry
106307746         CDS       T04124                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-3
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03010  Ribosome
boe04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    106307746
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    106307746
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:boe03011]
    106307746
   04121 Ubiquitin system [BR:boe04121]
    106307746
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:boe04147]
    106307746
Ribosome [BR:boe03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    106307746
  Archaea
    106307746
Ubiquitin system [BR:boe04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   106307746
Exosome [BR:boe04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   106307746
  Exosomal proteins of colorectal cancer cells
   106307746
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Dsc3_N Plexin_RBD DUF2604 UBL_UBAC1 TBK1_ULD Ubiquitin_5 Thioredox_PDIA6_C OTU1_UBXL
Other DBs
NCBI-GeneID: 106307746
NCBI-ProteinID: XP_013600243
UniProt: A0A0D3BWB1
LinkDB
Position
C8:33345988..33346702
AA seq 157 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKE
CPNATCGAGTFMASHFDRHYCGKCGLTYVYQKEGAEA
NT seq 474 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccctaacggggaaaacaatcaccctcgaggtcgagtcctcc
gacaccatcgacaatgtcaaggccaagatccaggacaaggaagggatccctcccgaccag
cagcgactgattttcgccgggaagcagctcgaagacggacgcacgctcgccgactacaac
atccagaaggagtcgacgcttcatctcgtcctccgtctccgtgggggcgcgaagaagagg
aagaagaagacgtacaccaagcccaagaagatcaagcacaagcacaagaaggtgaagctc
gctgtgctccagttctacaaggtggacggatccggcaaggtgcagaggctcaggaaggag
tgtcctaacgcgacttgcggtgccgggactttcatggcgagtcacttcgatcgtcactac
tgtggtaagtgtgggcttacctatgtttaccagaaggagggtgccgaggcatga

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