Brassica oleracea (wild cabbage): 106307793
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Entry
106307793 CDS
T04124
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 36a
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106307793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
boe03009
]
106307793
Ribosome biogenesis [BR:
boe03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
106307793
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
Methyltr_RsmB-F
PCMT
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
106307793
NCBI-ProteinID:
XP_013600301
UniProt:
A0A0D3DMW9
LinkDB
All DBs
Position
C8:16906049..16908250
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AA seq
320 aa
AA seq
DB search
MRPPLTGGRGGGGFSGGRGGGGYSGGRGGSSGGRGRGGGRGFGDRGGRGGGRGMSRGGGR
GDRGGRGRGGRGGMKGGSKVIVEPHRHAGVFIAKGKEDALVTRNLVPGEAVYNEKRISVP
NEDGTKTEYRVWNPFRSKLAAAILGGVDNIYIKPGAKVLYLGAASGTTVSHVSDLVGPEG
CVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFADVAQPDQARI
VALNASFFLKTGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQEQFKPAEQVTLEPFERD
HACVVGTYRAPKKAKAATAA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaggcctcctctaactggtggacgtggtggcggtgggttcagtggtggacgtggtggc
ggtgggtacagtggtggacgaggaggtagctctggaggtagaggaagaggaggaggaaga
ggtttcggagaccgtggtggacgtggcggcggtagaggcatgagcagaggaggaggtaga
ggagaccgtggtggacgtggcagaggaggacgtggagggatgaagggaggcagcaaagtg
attgtggagccacacagacacgcgggagtgttcattgccaagggcaaagaagatgctctc
gtcactaggaacttggttcctggtgaagctgtctacaacgagaagagaatctctgttccg
aatgaagatggaactaagactgagtacagagtgtggaaccctttccgctctaagctggcg
gctgctattctcggtggtgttgataacatttacattaaacctggtgctaaagttctgtac
cttggtgctgcttctggaaccacagtctctcatgtgtctgatcttgttggacccgaggga
tgtgtctacgcggttgagttttctcacagaagtggtagagatttggtgaacatggcgaag
aagaggactaatgttatcccaatcattgaagatgctagacaccctgccaaatacagaatg
cttgttggcatggttgatgttatcttcgctgatgttgctcagcctgatcaggctaggatc
gtggctttgaatgcaagcttctttctcaaaacaggaggtcactttgttatttcaatcaag
gcaaactgtattgactcaacagttccagcagaagccgtgtttcagagcgaagtgaagaag
ctgcaacaagagcagttcaagccagcagagcaagtgacgcttgagccatttgagcgtgac
catgcttgtgtcgttggtacctaccgtgcccctaagaaagccaaggctgctactgctgct
tag
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