Brassica oleracea (wild cabbage): 106307853
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Entry
106307853 CDS
T04124
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106307853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106307853
Enzymes [BR:
boe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106307853
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
106307853
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_UBOX
zf-RING_6
Beta-prop_NOL10_N
zf-Di19
Motif
Other DBs
NCBI-GeneID:
106307853
NCBI-ProteinID:
XP_013600381
UniProt:
A0A0D3DU36
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Position
C8:31497991..31500998
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AA seq
310 aa
AA seq
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MAPGGSALKEVLESTSTGMDYEVKIAKAEANNNNNKPTKSGIAGSGKYGMHSNNGVYELL
ECPVCTNLMYPPIHQCPNGHTLCSNCKARVQNACPTCRYELGNIRCLALENVAESLEVPC
RYQSLGCHDIFPYYSKLKHEQHCRFRPYACPYAGSECSVTGDIPTLVVHLKDDHKVDMHD
GCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENE
AKKFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKL
RVTGRIWKEE
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggctcctggaggcagtgctttgaaagaagtccttgaatccacttcgactggaatggac
tacgaggttaaaatagcaaaagcggaagctaataataacaataacaaacctacaaagtca
ggcatcgcagggagtggaaagtatggcatgcattcaaacaatggtgtctacgagcttctt
gaatgtccagtgtgcacaaacttaatgtaccctccaattcatcagtgtccaaatggccac
accttatgttcaaactgcaaagcgagagtgcagaacgcttgccctacatgtcgttacgag
cttggtaacataagatgcttagctctcgagaatgttgcagagtccttggaagttccatgc
cggtaccagagtttgggctgtcatgacatttttccttactacagcaagcttaaacacgag
cagcactgcaggtttaggccttacgcttgtccttatgctggctctgagtgttcggttaca
ggtgatatccccacgctagttgttcatttgaaagatgatcataaggttgatatgcatgac
ggatgcacttttaaccaccgttatgtgaagtcaaatccacatgaagtcgagaatgccaca
tggatgcttacggtgttcaactgctttgggagacagttctgtttacactttgaagcgttc
cagctggggatggctccagtgtacatggcattccttcgtttcatgggagatgaaaacgag
gcaaagaagttcagttacagtttggaagtaggagctcatggacgtaaactaacatggcaa
ggaatccctagaagcatccgtgacagtcacaggaaagtaagggacagtcaagacggtctc
atcatcccaaggaaccttgcactctatttctctggaggtgataggcaagaactcaagttg
agagtgaccggtcgaatctggaaagaagagtaa
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