Brassica oleracea (wild cabbage): 106308051
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Entry
106308051 CDS
T04124
Name
(RefSeq) small RNA degrading nuclease 1-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106308051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
boe03009
]
106308051
Ribosome biogenesis [BR:
boe03009
]
Eukaryotic type
Pre-60S particles
RNases
106308051
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GFIT
Motif
Pfam:
RNase_T
RRM_1
DNA_pol_A_exo1
DEDDh_C
SET_assoc
Motif
Other DBs
NCBI-GeneID:
106308051
NCBI-ProteinID:
XP_013600618
UniProt:
A0A0D3DRU7
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All DBs
Position
C8:26472084..26474593
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AA seq
412 aa
AA seq
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MELKLATAEKQVLEELVKLVQSRGLCGENGGWKEFLDAKDKKKIGSPNDPSKRSHDELVA
FLTTFKKKQDLQVLKCHANFLLIEKLEQECPGNDTPEQSLVRLTVEHPAYSVDYSFEPHS
EDWFVSDVGVKTSKVMESTDLVAVDCEMVLCDNGTEGLVRVGVVDRDLKVILDEFVKPDK
PVVDYRTDITGITAEDIEKATLSLVDIQETLQPFLSNGAILVGHSLNKDLEVLKIYHPKV
IDTALVFKYPNARKPRRASLNNLCKSILGYEVRKAGVSHDCVNDATAAMKLALAVIEKRA
NTTIPPSKEMLEVEKAKLFIHKIPHNVTSEELEQVLSGEFTLDVKPAKTSRGCYCAFVIF
RSSEEADQAFENVDGDQGQDSFGLPQKLVIFKLTSGSRVSIYVRKMVEDGSA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggagcttaaactagccaccgccgagaaacaagtgcttgaagagttggtgaagctagtg
cagagtagaggcctgtgcggcgaaaacggaggatggaaggagtttttagatgctaaagac
aaaaagaagattggatctccaaatgacccttcgaagcgttcccatgacgaacttgtcgcg
tttctgacaaccttcaagaagaaacaagacttgcaggttctgaaatgtcacgccaatttt
cttctaattgaaaagttagagcaggaatgtcctggtaatgacactccagagcagagtcta
gttcgattgactgttgagcatcctgcttactcagtagactattcattcgagccacactcc
gaggactggtttgtatccgatgttggagtgaagacgtccaaggtgatggaatcaaccgat
ctggtagctgttgactgtgagatggttctttgcgacaatggaactgagggtttggtcaga
gttggtgttgtagaccgtgatttaaaggtgattcttgacgaatttgtgaaaccggacaaa
cctgtggttgactataggacagacattacagggattaccgctgaagatatcgaaaaagct
accctctccctcgtagatattcaggaaactttgcagccctttctatcaaatggtgcgatt
ttggttggtcacagtttgaacaaagatttggaagtgctgaagatatatcatccaaaagta
atcgataccgcacttgtattcaagtatcccaatgcaagaaagcccagaagagcttcactt
aacaacctttgcaagtctattttgggttatgaagtcagaaaggcaggagtctctcatgat
tgtgtaaacgacgcaacagctgcgatgaaacttgcacttgctgttattgagaaaagagcc
aacacaacaatcccaccatctaaagagatgttggaggttgagaaagcaaagctttttata
cataaaatccctcacaatgtgacatctgaagagctggagcaagttctttctggagagttt
acacttgatgttaagccagcaaaaacatcgagaggttgctattgtgcgtttgttattttc
cgtagctcagaagaagcagatcaagcatttgaaaacgttgatggagaccaaggccaggat
tcatttggtttgccacaaaaactggttatatttaagctgacttctggttcaagagttagt
atatatgtccgtaaaatggttgaagatggttccgcgtag
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