Brassica oleracea (wild cabbage): 106308151
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Entry
106308151 CDS
T04124
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT4
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106308151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106308151
Enzymes [BR:
boe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106308151
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
106308151
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GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
zf-C3HC4_3
FAIM1
Motif
Other DBs
NCBI-GeneID:
106308151
NCBI-ProteinID:
XP_013600739
UniProt:
A0A0D3DN70
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Position
C8:17559015..17561250
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AA seq
321 aa
AA seq
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METESMDRESSTRSIPNDNEAYHFSSTKNHAGAAAAVVTNIVGPTSTAAATSVYELLECP
VCTFSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYY
NLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGVVGDIPFLVSHLRDDHKVDMHAGST
FNHRYVKSNPREVENATWMLTVFQCFGQYFCLHFEAFQLGMGPVYMAFLRFMGDEEEARS
YSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGFIIQRNMALFFSGGDRKELKLRIT
GKIWIEQHSPDSGLCIPNLSS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggagacggagagtatggatcgcgaatcgtcgacgagaagcatccctaacgataacgaa
gcttaccatttctcttccacgaagaatcacgccggagctgccgccgccgtcgttaccaat
atagtcggtccgacgtcaacggctgctgccactagcgtctacgagcttctggagtgccct
gtctgcaccttttctatgtaccctcctatccatcagtgtcataatgggcacacgttatgc
tcgacttgtaaagtgagagtgcacaaccggtgtcccacgtgtagacaagagcttggagat
ataagatgtttagctcttgagaaagtagccgagtcgcttgagctgccttgcaagtattac
aacctcggatgccctgagatttttccttactacagcaaactaaagcacgagtctctctgt
aacttcagaccgtactcttgtccttacgctggctccgagtgcggtgtcgtaggggacatc
cctttccttgtatcccatctcagggatgatcacaaagttgacatgcacgctggctccact
tttaaccaccgttacgtcaaatccaatccgcgtgaagtagagaacgctacttggatgctt
actgtgtttcaatgctttgggcaatacttctgcctccattttgaggcgttccagctcggg
atgggtcccgtgtacatggcgttcctgagattcatgggggacgaggaagaagcaaggagt
tatagctacagtttagaagtgggagggagtgggaggaagctaacgtgggaaggaacacca
agaagcatcagagatagccacaggaaagtaagagacagcaacgacggtttcatcatccaa
agaaacatggctctcttcttctccggcggtgataggaaagagcttaaacttagaatcact
ggtaaaatatggatagagcaacacagtccagattctgggctctgcataccaaacctatct
tcatga
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