Brassica oleracea (wild cabbage): 106308205
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Entry
106308205 CDS
T04124
Name
(RefSeq) threonine--tRNA ligase, mitochondrial-like
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106308205
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
boe01007
]
106308205
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
boe03016
]
106308205
Enzymes [BR:
boe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
106308205
Amino acid related enzymes [BR:
boe01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
106308205
Transfer RNA biogenesis [BR:
boe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
106308205
Prokaryotic type
106308205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
tRNA-synt_His
Motif
Other DBs
NCBI-GeneID:
106308205
NCBI-ProteinID:
XP_013600795
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All DBs
Position
C8:37194027..37198311
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AA seq
632 aa
AA seq
DB search
MADEHPRDEAYLSAVIEKRIRLFEEFQAKQLAEIQSRPHDPIKVTIRDGGNVKEGKRWET
TPAEIARQISVELANSALISSVNDVLWDMNRPLEADCSLEFFSFDSDKGRDTFWRSSAHI
LAQVLEQEYGCKLCIGPCKARDEGFFYDAFYGDLGLNEQHFPDTEAGDAREGHPFERIEV
TRGQALEMFPDDNTFKVELLTEDKTTVYRCGPLVDLCSGPHIPNTSFVKAFKCLNLLSVL
LGHHHQLFFCHPLSPGSWFFEKHGTRVYNKLMHFIGNEYRKRGYEEVISPNIYNMKLWET
SGHAANYKENMYTFDIDKQEFGLKPMNCPGHCLMFQHRLRSYKELPIRLADFGVLHRNEA
SEALSGLTHTRRFQQDDAHIFCTKDQVSRELKRALEFVDYVYTKFGFTYELKLSTRPEKY
LGDLTTWDRAERDLEEALEGFGKPFLVNRGAGEFYGPKIDITVSDAMKSYVQCATLQLDF
QLPALFELEYTAMAEGNSDTPVMIHRAVLGSVERMFTTLVEHYKGKWPFWLSPRQAIVCS
LSKDSHEYAERVREQIHEAGYYVDVDITDRNISKKVREAQVAQYNYILVVGAEETTTGHV
TVRRRNEDLSEFPVLSVENLLDEFKLKTANFL
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaacatcccagggacgaggcttatctctcagccgtcatcgagaagcgtatc
aggctcttcgaggagttccaagcgaagcagctcgcggagattcagtctcggccacacgat
cctatcaaggttacaattcgagatggtggaaacgtgaaagaagggaagagatgggagacg
actccagcagaaatcgcgaggcaaatttctgtggaattggcaaactcagcgctgatttct
tcggtaaacgatgtcctctgggacatgaataggccactggaagctgattgttcgcttgag
tttttcagttttgacagcgacaaaggccgtgatactttctggcgttctagcgctcacatt
ctcgcccaggttctcgaacaggagtatggttgtaagctgtgcattggaccctgcaaagct
agagatgagggtttcttctacgatgcattctatggcgatctgggcttaaacgagcaacac
tttcccgacactgaagcaggggatgctcgagagggacatccatttgaaaggattgaagtg
accaggggtcaggcacttgagatgtttcctgatgataatacttttaaggttgaactcctc
accgaggacaaaaccaccgtctacaggtgtggtcctttggttgatctgtgtagtggacca
catataccaaatacttcctttgtgaaagctttcaagtgtttgaatttgctttcggtgcta
ttaggccaccatcaccaacttttcttttgtcacccactcagccctgggagttggttcttc
gagaaacatggcactcgcgtatataataagctgatgcatttcatcgggaatgaatatcgg
aaaaggggctacgaagaggttatttcaccaaatatttacaacatgaaactctgggaaaca
tccggacatgctgcaaactacaaggaaaatatgtacacgtttgatattgataaacaagag
ttcgggctcaaacctatgaactgccctggtcactgcttgatgttccaacacaggcttcgc
tcgtataaagaattacccattagacttgccgactttggagtgttacatcgaaatgaggca
agtgaagctcttagtggcttgacccatacccgacggttccagcaggatgatgcacacata
ttctgtacaaaggatcaggttagtagagaattgaaacgtgcattggaattcgttgactat
gtttacacaaaatttgggtttacctatgagctaaagctctcaacgagaccagagaagtac
cttggagacttaacaacatgggatagagctgaaagggaccttgaagaagcactagaaggt
tttggaaagccattccttgtgaacagaggagccggggaattttatggcccgaagatagac
ataacagtatctgatgcaatgaaaagctacgtccagtgcgctactttgcaacttgatttt
caacttcctgccctcttcgagctggaatacacagctatggctgaagggaattcggataca
cctgtgatgatacatagagcggtgttaggatctgttgagcgtatgtttaccacattggtg
gagcattacaaaggaaaatggcccttctggcttagtccgcgccaggccatagtctgctca
ctgtcaaaggattctcatgaatacgctgaaagggtgagagaacaaattcatgaagctggg
tactatgttgatgttgacataacagacagaaacatcagcaagaaggtgcgagaagctcag
gttgcgcagtacaactacatactggttgtgggtgctgaagaaactacaacgggacatgtg
actgttcggcgaagaaacgaagacctttcagagttcccagtgctgagcgtcgagaatctg
ctggatgaattcaaactcaagacggccaactttctctga
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