Brassica oleracea (wild cabbage): 106308266
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Entry
106308266 CDS
T04124
Name
(RefSeq) fanconi-associated nuclease 1 homolog isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
106308266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
boe03400
]
106308266
Enzymes [BR:
boe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
106308266
DNA repair and recombination proteins [BR:
boe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
106308266
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
HIRAN
FAN1_HTH
FAN1_TPR
PADR1_N
Motif
Other DBs
NCBI-GeneID:
106308266
NCBI-ProteinID:
XP_013600868
UniProt:
A0A0D3DJR4
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Position
C8:complement(3016156..3020607)
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AA seq
866 aa
AA seq
DB search
MLTGRESLLRLIGKRRRSLPSRHNLLSTPTPNSLNLDVNDSGNLISPIRDNIRSPETPTS
PGNSDDLCLSRKNKKKRRLTQTTLLQWSGSKQSEDSPFIHPQKQQQQQQSILEFDDDSSS
EEISKTVALDEANGDEAIQTFIVGRKFSDIQDLEVGAKICLLRHPENIKDPNAIKVLSSD
SGLSEMLGYLPKDVSQCLSPLIDQYGLKFEGTITCVPKNSSEAVPVKVVCHKMTSDGWKE
SESAGGDFKLLWEKVLQVVEHQMQFPPKTTRYQLNFNVLVQEVLRSCSHLFTADEKTFLE
SFPSLSEDSQRLFIRLYTRKGPWFRLSNISYPEVSDSLQALKDLTVSGFMSSVEDANDLS
YQKMKEITELLNVTELRDILSVNKVFSRGSRKRDLIDSLCSYYNDRTRMDIGTMILERTG
LCAKISSTAESLIWRVERLFFLNGEQDLSSFVLLDLGIIKYPTYKCIDSDQIFSDRAKLL
AYEEAIEVAQLMDESLDSEDSGTVLKCIMIAETRISSSSSSESALFNCFTAPWVYSKMVL
LGVSFLENQKRYNQAVYLLRRLLSCFNCDGRRGYWTVRLSTDLEHMGRPNESLSVAEQGL
LDPWVRAGSRIALQRRVLRLAKPPRRWKTPTFPNLIDNKIPEVTIQGRSLNCEVGMKNRF
YGEDGEQCGVEQLALQYYNGGGGWQGMHTESSIWLTIFGLLMWDILFSDVPGVFQTRFQT
APLDLDTESFYLTRKETIESQLEKVANGMAEEILIISYETHRGTACRGVVWERFSLEELR
AAVACVGGKCVASLCRYLAQDYRSWCSGMPDLLLWRFKENGYEGEAKLVEVKSEKDRLSE
QQRAWLLLLMDSGFNVEICKVRPACV
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccggacgagaaagcctgcttcggttgatcggaaaacgccgccgatctctcccc
agtcgccacaatctcctttcaactcctactccgaactcgttgaatctcgatgtcaacgac
tctggcaatctcatctctccaatcagagacaatatccgttctccggagactccgacttct
cccggcaactctgatgatttgtgtctatcaaggaagaacaagaagaagcggagattgact
cagaccactcttcttcagtggtcagggtccaaacaatctgaagatagtcctttcatccat
ccccagaagcagcagcagcagcagcaatcaatactcgaatttgatgatgactcaagtagt
gaggagatttcgaaaactgtggctttagacgaagccaatggtgacgaagctattcagact
tttatagttggtaggaagttcagtgatattcaggatttagaagttggggcaaagatctgt
cttttgagacaccctgagaacatcaaggatcccaacgctataaaggtactttcttctgac
tctgggttgtctgagatgcttgggtatctacccaaagatgtttcccagtgcttgtcccca
ctgattgaccaatatggtcttaagtttgagggaacaataacttgtgttccgaagaattct
tccgaagctgttccagttaaagttgtttgtcacaagatgacatctgatggttggaaagaa
agtgaatctgctggtggagattttaagcttctgtgggagaaagttcttcaggttgttgag
catcagatgcagtttccgcctaagacgacgagataccagttgaacttcaatgtattagta
caagaggttctcagaagctgctctcacctattcacagccgatgaaaagacattcttggaa
tccttcccatctctttcagaggatagccagagacttttcatccgtctttacacacgaaaa
ggaccttggttcaggctctcaaatatttcataccctgaggtatctgattctcttcaagct
ctgaaggatctaacagttagtggattcatgagttcagtggaagacgcaaacgatctaagt
taccaaaagatgaaggagatcacagagttgcttaacgtcactgaacttcgtgatatctta
tctgtaaacaaggtgttcagccgtggctcaagaaagagagaccttatagattcactttgt
tcttattacaatgatagaacaaggatggatataggaacaatgattctagaaagaacagga
ctgtgtgctaagatatccagcacagcagaatctctcatatggcgtgttgagaggcttttc
tttctcaacggagagcaagatctatcctcttttgttctgctagatcttggtattatcaaa
tacccaacctacaagtgcattgactcggaccaaatattttcagaccgggctaagctttta
gcatatgaagaggccattgaagtggctcagttgatggatgagtctcttgacagtgaggat
tctgggacggtgttgaaatgcatcatgattgctgagacccgcatatctagttcctcttct
tcagaatctgcgctatttaattgctttacagctccatgggtttactcaaagatggttctc
ttaggagtttcctttcttgagaaccaaaagagatataaccaagcagtttatctactgaga
cgtctgctcagttgcttcaactgtgacgggagaagaggatactggacagtcaggttatca
acagatttagagcacatgggacgaccaaacgagagtctttcagtagcagaacaaggacta
ctggatccttgggtgcgtgctggttcaagaatagctttgcaacgacgtgttcttcgtcta
gcaaaacctccaaggcgctggaaaactcccacctttccaaatctcatcgacaacaagatc
cctgaggtcaccattcaagggaggtcattgaactgtgaagttggcatgaagaacaggttt
tatggagaagacggagagcagtgtggagttgagcagctcgcattgcagtattacaacgga
ggaggaggatggcaggggatgcatacagagagtagcatctggttaaccatttttggtctt
ctcatgtgggacattctgttctctgacgtccctggtgttttccaaacccggttccagact
gctccattggacttagatactgaatccttctatctaaccaggaaggaaacaatcgagtca
cagctagagaaagttgcaaacggaatggctgaagagatacttatcatatcatatgaaaca
caccgtggaacagcgtgcagaggagtggtgtgggagcggttttcgttggaggaactgaga
gcagcagtggcttgtgttggaggcaagtgtgtagcatcgctttgccggtatctagctcaa
gactataggagctggtgcagtggaatgcctgatctgcttctgtggcggttcaaggagaat
ggttatgaaggtgaagctaagcttgtggaagtaaagtcagagaaagataggttatcagaa
cagcaacgagcttggcttctgcttctaatggattcaggcttcaatgttgagatttgcaaa
gtaagacctgcttgtgtttaa
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