Brassica oleracea (wild cabbage): 106308379
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Entry
106308379 CDS
T04124
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00040
Pentose and glucuronate interconversions
boe01100
Metabolic pathways
Module
boe_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106308379
Enzymes [BR:
boe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
106308379
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
ValRS_modifier
Motif
Other DBs
NCBI-GeneID:
106308379
NCBI-ProteinID:
XP_013600991
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All DBs
Position
C8
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AA seq
268 aa
AA seq
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MNKLLDFFPYERLTYGNPILSISFSSANDVIISGVKSMNSQITHMTLNGCTNVAVRNFKL
VAPKNSPNTDGFDVQLSTGVTFTGSTVQTGDDCVAIGPGTRNFLISKLPCGPGHGVSIGS
LAKELNEDGVENVTLSSSVFTGTQNGVRIKSWARPSTGFVKNVFFQDLIMKNVQNPIIID
QKYCPDHQGCLTEHSGVKISQVTYKNIQGTSATKQAMKLVCSKSNPCTDITLQDIKLTYK
KGTPATSYCFNALGTSLGVIQPISCLNQ
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagctacttgactttttcccgtatgagcgcttaacgtacggaaatccgatcttg
tccatatcgttcagctcggcaaatgacgtgatcataagtggagtgaaatcaatgaacagc
cagatcactcatatgaccctcaacggttgcaccaatgtggccgtccgtaacttcaagcta
gtggctcccaaaaacagcccaaacaccgacggctttgacgttcaattatccaccggagtc
acattcaccggaagcacagttcagaccggagacgattgtgttgctatcggacctggtact
cgcaactttctcatctccaaacttccttgtggcccaggtcatggtgttagtattgggagc
ttggcaaaggaattaaacgaagatggagtagagaatgtgacactatcgagttctgtattc
accggcacacaaaacggcgtgaggataaagtcgtgggcgagaccaagcaccggatttgtt
aagaacgtcttcttccaagacctaatcatgaagaacgtccaaaaccctatcataatcgac
caaaaatattgtcctgaccaccaaggttgccttaccgagcattcgggggtgaaaataagc
caagtgacgtataagaacatacaaggaacgtcggcaacaaagcaagcaatgaagctggta
tgcagcaagagcaacccatgcacagatatcacattacaagacattaagcttacttacaag
aaaggaactcctgctacttcatattgtttcaatgctcttgggactagtctcggtgttatt
caacctattagctgtctaaaccaataa
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