Brassica oleracea (wild cabbage): 106308691
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Entry
106308691 CDS
T04124
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
boe03009
]
106308691
Enzymes [BR:
boe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
106308691
Ribosome biogenesis [BR:
boe03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
106308691
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmF_N
RsmF-B_ferredox
Motif
Other DBs
NCBI-GeneID:
106308691
NCBI-ProteinID:
XP_013601277
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All DBs
Position
C8:complement(13247282..13248472)
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AA seq
229 aa
AA seq
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MASQLPAMYSSSQTIFIDRAKAKEEEDADAEHLGFNKEVGPGKESEQDTFRLPTEEELEE
EYRGPPDLPLPQSRIKEIVRALSNFNGLRPKGASRKDCAEQLKSDLASYYGYSLLIGTLF
ELFLPVELMEIKLMEIIEAFDKQRPSSIWTNTLKTRRRDLADVLLNRGVNPDPLSKWSKL
GLVVYDSQVPIGATPEYLAGYYMVSDLLTRACSDFGKPVMSRKEEHLWG
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggcatcccaacttcctgcaatgtacagttcatctcaaacgatatttattgacagagcg
aaagcgaaagaggaggaagatgctgatgctgagcatctcggtttcaacaaggaagttgga
cctggtaaagaatctgaacaggatacgtttcgcctgccaactgaagaggagcttgaagaa
gaatatcgtgggccacctgatcttcctctaccgcaaagtagaatcaaagagattgttaga
gctctgtcgaattttaacggtctgaggccaaagggagcgagcaggaaagattgcgctgaa
cagctcaaatctgatcttgcttcttattatggctatagtcttcttattggaactttgttt
gagctgtttcttcctgttgaacttatggaaattaaacttatggaaataattgaagccttt
gataagcaaaggccttcatctatctggacaaacacacttaagactcggagacgggatctt
gctgatgtgcttttgaacagaggagtcaatccagacccattaagcaagtggtcaaaactc
ggacttgtagtttatgattcacaagtgccaatcggtgccactcctgaatatttggctggt
tactacatggttagtgatcttctgacccgtgcatgttctgattttgggaagcccgtaatg
tcaagaaaggaggagcacttgtggggttga
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