Brassica oleracea (wild cabbage): 106309487
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Entry
106309487 CDS
T04124
Name
(RefSeq) autophagy-related protein 18d
KO
K22991
WD repeat-containing protein 45
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106309487
Membrane trafficking [BR:
boe04131
]
Autophagy
Other autophagy associated proteins
Others
106309487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
BCAS3_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_2nd
ANAPC4_WD40
WDR55
Beta-prop_EML
Beta-prop_Vps41
Beta-prop_RSE1_2nd
Beta-prop_HPS5
RMC1_N
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
106309487
NCBI-ProteinID:
XP_013601973
UniProt:
A0A0D3DTN3
LinkDB
All DBs
Position
C8:30561952..30564855
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AA seq
387 aa
AA seq
DB search
MTSTLYNSQGILHPRGFRSPEPGFGDSDGAELVSVSWNQDYSCFSSGTSHGFRIYNCEPF
KETFRRELKDGGFKIVEMLFRSNILALVGGGPNSQYPSNKVLIWDDHQSRCISEFSFRSE
IRAVKLRRDRIVVVLEHKIYVYNFMDLRLLHQIENLANPRGLCCLSHHMNTSVLACPGVR
RGEVRVEHFGLNMVQIINAHDANIACMTMTLDGLLLSTASTKGTLIRIFNTMDGTRLQEV
RRGTDRADIYSIAFSPNVQWLAVSSDKGTVHIFSLRVRVSGEDSHSTEHETSSNSLQALV
TPASGVNPGSSLSFLRGVLPRYFSSVWSFAQFHVPEVTQFFAAFGAQNTIAIIGMDGSFY
RCSFDPVNGGEMTQLEYVRFLKPGTLK
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaactctttacaactcgcaagggatcctccacccacgagggtttaggtctcca
gagccaggttttggtgacagtgatggagcagagttggtttctgtttcttggaaccaggat
tacagctgtttttcttctgggaccagccatggtttccggatatataactgcgagcctttc
aaggagacgttcaggcgagagctcaaggatgggggtttcaaaatcgtggagatgcttttc
cggagtaatatcttggcgctcgttggcggtggacctaactctcagtacccttcgaacaaa
gtactgatttgggatgatcatcagagccgctgcatcagtgagttttcgttcaggtcggag
attcgtgcagtgaagttaagaagggatcggattgtcgttgttctcgaacacaagatatat
gtctacaatttcatggacctaagacttcttcatcagattgaaaacctggcgaatccaagg
ggattgtgttgcctctctcatcatatgaatacatctgtgctggcctgtccaggtgttcgt
cgaggagaggtccgtgttgaacattttgggcttaacatggtacagatcattaacgctcat
gacgccaatatcgcgtgcatgaccatgacattggatggactgcttctttcaactgccagt
acaaagggaactctgattagaattttcaacacaatggatggaactcgtctgcaagaggtc
cgaagaggaacggacagagcagatatctatagcattgctttttcaccgaatgtgcaatgg
ctggcagtatcaagcgacaaggggactgtccatattttctctcttagagtgagggtttct
ggggaggactcacactccactgaacatgagacgtcttcaaattccctgcaggctcttgta
actccagccagtggtgtcaaccctggttcgtcattgtcatttctgagaggagttctgcca
agatatttcagctcggtgtggtcatttgctcagttccatgtaccagaagtcacccaattc
tttgcagcatttggcgctcagaacacaattgctattatcggcatggatggaagtttctac
agatgcagtttcgatccagtgaacggaggagagatgactcagcttgaatacgtccgcttt
ctgaagccggggaccctaaaatag
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