Brassica oleracea (wild cabbage): 106309625
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Entry
106309625 CDS
T04124
Name
(RefSeq) crossover junction endonuclease EME1B
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03440
Homologous recombination
boe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106309625
03460 Fanconi anemia pathway
106309625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
boe03400
]
106309625
DNA repair and recombination proteins [BR:
boe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
106309625
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Gene cluster
GFIT
Motif
Pfam:
ERCC4
EME1-MUS81_C
Motif
Other DBs
NCBI-GeneID:
106309625
NCBI-ProteinID:
XP_013602148
UniProt:
A0A0D3DW29
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Position
C8:35528328..35531649
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AA seq
542 aa
AA seq
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MEDHILISDGEDPATPLPSLSKRARKDPISAILISDSDPTPFKQQPESSSTPLFVPDTPL
SDDFSLVKCSFASGALASNREDKFSGKRVISLDSEFEDSPGPETSKKHGPVLADIEEPRC
GLDSRSSVAEASTGIAQPSFGDNTNWMHEVSVRSSLTNDTIEVDSEQEKENISIENMGRK
KQIRSCKSRTLTGGEFPKKQLSREEKIRVMEEKKLRKEEEKLQKAIEAERKKLDKEKQKW
EKGKLALKSIVAEIDTKLVEGSIGGLLLSRFSEKGITFRVAPNPIERSIVWTMTIPEDIA
LAFPEGPTISYVVLMYEAEEFCNLVANEKFLENITRVQDRYPSYTVCCLTNKLMSYVKKR
EKEEYKNPGSWIRPPIDEVLAKLTTHYVRVHSRDCVDEAEVAEHVVGLTTSLASCQFRKK
LTMLSVNANGALVSKDSVDKHLIKKSPWLKALVAIPKVQPRYAVAVWKKYPSMKSLLKVY
MDPNISIHEKEFLLKDLKVEGLVGGDIRLGEVCSKRIYRVLMSPSGTIKTDDVENGAAFF
TH
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccatatccttatctccgacggggaagatccggccactccactcccatcactc
tcgaaacgggctcgaaaagatccgatctctgcgattctgatatccgattccgatccgacg
ccgtttaagcaacagccggaatcttcttccactcctttgttcgtccctgatacacctctc
tccgatgatttctctctcgtcaagtgttcctttgcctccggagccttagcttcaaaccga
gaagataaattctctgggaaacgagtgatatctctggattcagagtttgaggatagtcct
ggacctgaaacctcgaagaagcacggacccgtgcttgctgatattgaggagccgcgttgt
gggttggattctagatcaagtgttgctgaggcgagtactggaatagctcagccaagtttt
ggtgataatactaattggatgcatgaagtcagtgttcgctcttcactgaccaatgatact
atcgaggttgattctgagcaagagaaagaaaatataagcatcgagaatatgggccgaaaa
aagcagatcagaagttgtaagagtagaactcttacgggtggagaatttcccaaaaagcag
ctgtcgagagaagaaaaaatccgtgtaatggaggaaaagaagttaagaaaagaggaagag
aagttacagaaagcgattgaagctgagcgtaaaaagttagacaaggaaaaacagaaatgg
gaaaagggaaagttagctctgaaatctatcgttgctgagattgataccaaactagttgaa
ggatccattggaggacttctactttcaaggttctctgagaaaggcattacattccgtgta
gcacctaatcctatcgagagatccattgtctggacgatgacaattccagaggatattgct
ctggctttcccagaagggccaacgatcagttatgtcgtactaatgtatgaggctgaagaa
ttttgtaaccttgttgctaatgaaaaatttctagaaaacatcacaagagttcaggaccga
tacccatcttatacggtgtgctgtctcaccaataagttaatgtcttatgtaaagaaaagg
gaaaaggaagagtacaagaacccgggaagttggatacggcctcccatcgatgaggtactt
gcaaaattaactactcactatgtaagagtacattccagagactgtgtagacgaggctgag
gtcgctgaacatgtagttggtttaactactagtctggcttcttgtcagttcaggaagaaa
ctaactatgttatcagtaaacgctaatggtgcattagtctccaaggattcagttgacaaa
cacttgattaaaaagagtccatggttaaaagcgttagtggcaataccgaaggtgcagcca
agatatgcggtagcagtgtggaagaaatatccatctatgaagtctcttcttaaggtttat
atggaccctaacatatcgattcatgagaaggagtttctacttaaagacttgaaagtagaa
ggtttagtaggaggagatataaggttaggtgaggtttgttcaaagcggatatatagagtt
cttatgtctccaagtggaaccattaagactgatgatgttgaaaacggtgctgcttttttc
acacattag
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