Brassica oleracea (wild cabbage): 106309868
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Entry
106309868 CDS
T04124
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106309868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106309868
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106309868
mRNA degradation factors
5'-3' decay
Decapping complex
106309868
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
106309868
NCBI-ProteinID:
XP_013602464
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Position
C8:1936768..1939383
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AA seq
367 aa
AA seq
DB search
MFQNGKLVPPNMHQYQNSTRLLNLKVLRRIDPFIEEILITAAHVTLYEFNIQKSEWSRKD
VEGSLFVVKRNRQQPRFQFIVMNRRNTDNLVEDLLGEFEYQVQGPYLLYRNTGRHYTCLL
FPYSSSPNGSLGNVRLLSAYSKVNQKPNTSSSKRELEELEDVPTVSVMDGSLEPSSSGRD
TPNDPAFVNFFSSAMALGNTTSGSASGPPYQSSANPHQTHQPTVAPAAAAPPQILSPPPL
PSSSPLMPLFDNNPNRTSSNNSNVHTDLVTPSSFFSPPRMMAQPHLVPGSSMPPLNLNNP
TYQQDAHGTPMLQPFPPPTPPPSLAPTHNGPVINRDRVKEALLALVQENEFIDMVTRALQ
NAHQPSS
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagaacgggaagctggtcccaccgaatatgcaccagtaccagaacagcacgagg
ctcctcaatctcaaagtcctccggcgaatcgatccgttcatcgaggaaatcctcatcacg
gcagctcacgtcaccttatacgaattcaacattcagaaaagtgaatggagtcgtaaggat
gttgaaggatctttgtttgttgtcaaaagaaatagacagcagcctcggtttcagtttatt
gtgatgaatcgacgtaatacagataacttggtggaagatctactgggagagtttgagtat
caagtgcaaggtccatatttgctttaccgtaatactgggagacattatacatgtttatta
tttccatactcttcttcccctaatggttcccttggcaatgtcaggttacttagcgcatat
tccaaggttaaccagaagccaaatacttcatcttcaaaacgggagcttgaggaattggaa
gatgtgcctacagtgtcagttatggatggttctcttgaaccgtcttcaagtggtagagat
acccctaatgatcctgcttttgtcaacttcttcagctcagcgatggctcttgggaacact
acgagtggatcagcaagtggaccaccataccaatcatcggcaaatcctcaccaaactcac
caacccaccgttgcccctgcggcagctgcacctccacagatactatcaccaccgcctcta
ccatcctcctcgcctctaatgcctctttttgacaacaatcctaatcgtaccagtagcaac
aactccaatgttcacacagatttggtgacgccgtcctctttcttcagccccccacggatg
atggcacaaccacacctcgttcctggctcatctatgcctcctctgaaccttaataatccg
acttaccagcaggacgcacatggcactccgatgctccagcctttcccaccaccaactcca
ccaccatcactcgctcctacacacaatggcccagttatcaacagagacagagtcaaagaa
gccttgttagctctggttcaggagaatgaattcatcgacatggtgacccgagctttacaa
aatgcacatcaaccatcaagctga
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