Brassica oleracea (wild cabbage): 106309975
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Entry
106309975 CDS
T04124
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 14
KO
K05391
cyclic nucleotide gated channel, plant
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
106309975
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
boe04040
]
106309975
Ion channels [BR:
boe04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106309975
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF2786
Motif
Other DBs
NCBI-GeneID:
106309975
NCBI-ProteinID:
XP_013602604
UniProt:
A0A0D3DVL5
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Position
C8:complement(34411186..34414838)
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AA seq
733 aa
AA seq
DB search
MEFKRDNTVRFYGEEKQTLEATEKRQPLPMLKPSTTQFLKPELVIPKKTNKTRLFKLPRF
GGLKVFPENFEIERDKILDPGGDVVLQWNRVFLFWCLVALYVDPLFFFLSSVKNTGRSSC
MTTDLKLGIVVTFFRTLADLFYVLHIVIKFRTAYVSRTSRVFGRGELVKDPKLIARRYLR
SDLIVDLIACLPLPQIVSWFILPSIRSSHSDHTTNALVLIVLVQYIPRLYLIFPLSAEII
KATGVVTTTAWAGAAYNLLQYMLASHILGAAWYLLSIERQATCWKAECHNELGPIRCVTD
FFDCGTVNREDRNNWQNVTVVFSNCDPSNKIRFTFGIFADALTKNVVSSPFLEKYLYCLW
FGLQQLSSYGQNLDTSTSVLETMFAILVAIFGLVLFALLIGNMQTYLQSITVRLEEWRLK
RRDTEEWMGHRQLPQNLRERVRRFVQYKWLATRGVDEETILHSLPADLRRDIQRHLCLDL
VRRVPLFAQMDDQLLDAICERLVSSLSTQGNYIVREGDPVTEMLFIIRGKLESSTTNGGR
TGFFNSITLKPGEFCGEELLVWALLPKSKVNLPSSTRTVRALEEVEAFALQAEDLKFVAN
QFRRLHSKKLQHTFRYYSHQWRTWAACFVQVAWRRYKRRMLAKSLSLAESYSSYEEEEAL
ATAAAEEIMSQQEERQSSTPSRHHTSIEKPHFAATVLASRFAKNTRRASRKIKDVDVPML
PKPEEPDFSVDAD
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggagttcaaaagagacaatactgtcagattctatggagaagagaagcaaaccctagaa
gcaacagagaagcgtcagccattaccaatgttaaaaccgtcaacaactcaatttctaaaa
ccagagttagtaatcccaaagaagactaacaaaacccgtctcttcaaactcccaagattc
ggtggactcaaagtgttcccggagaacttcgagatcgagagagacaagattctcgatcct
ggcggtgacgtagtgcttcaatggaacagagttttcctcttctggtgtctcgtcgctctt
tacgtcgaccctttgttcttcttcctgtcttcagtcaaaaacaccggtcggtcctcttgt
atgaccacagatttgaaactcggaatcgtcgttactttcttcagaacactagcggatctc
ttctacgtcttgcacattgtcatcaagttcagaacagcttacgtctctcgtacttcgaga
gtgtttggtcgtggagagcttgtgaaagatccaaagctgattgctagaagatacttgaga
tcagatctcatcgttgatctcatcgcttgtttgcctcttcctcagattgttagttggttt
atcttgccatcaatcagaagctctcactcagaccataccacaaatgcacttgtcctcatt
gttctagttcagtacattcctaggctttatcttattttccctctaagcgctgagattatc
aaagcgaccggagttgttacaaccaccgcttgggccggtgctgcttacaaccttcttcag
tatatgctcgctagtcatattcttggtgcggcatggtatctactgtcgatagagcgtcaa
gcaacgtgttggaaagcagaatgtcataacgaattaggcccaatacgatgtgttactgat
ttctttgactgtggtacagtgaaccgagaggataggaataactggcagaatgttactgtt
gtcttcagcaactgcgatccttcaaacaagatacggttcactttcggcattttcgcagat
gctctcaccaaaaatgtagtctcatctcccttcttggagaaatatttgtattgcctatgg
tttggtttgcagcaactaagttcttacggacagaatcttgacacaagtacatctgttcta
gagacaatgtttgctatcctcgtggctatctttggtctggttttgtttgctcttttaatc
ggaaacatgcagacgtatttgcaatcgatcacggtgaggctagaggagtggagattgaag
agaagagacacagaagaatggatgggacatcgtcaactacctcagaacttaagagagaga
gtgagacgttttgttcagtacaaatggttagccactagaggagttgatgaagagaccatt
cttcattcgttacctgctgatcttcgaagagacatccaacgacatctctgtctcgacctt
gttcgtcgtgtaccgctatttgcgcaaatggatgatcagttactagacgcgatatgcgaa
cggttagtgtcatctctaagcacgcaagggaactacattgtacgtgaaggcgatccagtg
accgaaatgctcttcatcatccgtggaaagctcgaaagctcgacgactaatggaggcagg
acaggattcttcaactcaatcacactcaaaccaggagagttctgcggagaagagcttctc
gtttgggcgctacttccaaaatcaaaagtcaacctaccatcatctacgagaacggtgcga
gctctagaagaagtcgaagcctttgctttacaagcagaggatctcaagtttgtggctaac
cagttcagacgtttacatagcaagaagctgcaacacacattccgttactactctcaccag
tggagaacatgggctgcttgcttcgtgcaagtggcttggagacggtataagaggagaatg
ctggctaagagtcttagcttggctgagtcatactcttcttatgaagaagaagaagctctt
gcgacagctgcggccgaggagataatgagtcaacaagaagagagacagagcagtactccg
tcgcgccatcatacttctattgagaaaccgcattttgctgcaacggtacttgcttcgagg
tttgctaagaacacgaggagggcttctcgtaagataaaggacgttgatgtacccatgctt
cctaaaccggaagaaccggatttctctgtggatgcagattaa
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