Brassica oleracea (wild cabbage): 106310349
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Entry
106310349 CDS
T04124
Name
(RefSeq) U-box domain-containing protein 13
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
106310349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106310349
Enzymes [BR:
boe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106310349
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
U-box type E3
106310349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
Neurochondrin
KAP
zf-RING_UBOX
MCAfunc
zf-Nse
RPW8
zf-C3HC4_4
MLKL_N
zf-C3HC4_2
zf-C3HC4
zf-NOSIP
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
106310349
NCBI-ProteinID:
XP_013603034
UniProt:
A0A0D3A8T5
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All DBs
Position
C1:complement(20548249..20551185)
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AA seq
661 aa
AA seq
DB search
MEEEKGAVAQSLIDVVNEISSVSEYRTTVKKLCSNLARRLKLLVPMFEEIRESNEPINED
TLKTLVSLKEAMSSAKNYLKFCSQGSKIYLVMEREQVTSKLLEVSVQLEQSLSKIPYEDL
DISDEVREQVELVLSQFRRAKGRVDASDDELYEDLQSLCIKSSDVDDYQPTLQRVAKKLH
LMEIPDLAQESVALHEMVASSGGDAGESIEEMAMVLKLIKDFVQIETNNSEDQSAGVNSS
SNGQTSTAASHKIPVIPDDFRCPISLEMMRDPVIVSTGQTYERTCIDKWIEAGHSTCPKT
QQALTSTTLTPNYVLRSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWR
LAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLATPDSRIQEHSVTALLN
LSICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPP
LVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAI
LAILSSHPEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSVDPQHLVEAQKLG
LMGPLIDLAGNGTDRGKRKAAQLLERISRLAEQQKETAAQAQNTEEAEPTHSASTTEAAD
T
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagagaaaggtgcggttgcgcagagcttaattgatgtagtgaacgagatttcg
tccgtttccgagtaccgtacaacggtgaagaagctctgcagtaatctggcgaggaggttg
aagctgcttgttccgatgttcgaggaaatcagagagagtaacgagccgatcaatgaagat
acgttgaagacgttggtctccttgaaggaagccatgtcctcggcgaagaattatcttaaa
ttctgcagccaagggagcaagatttatctggtcatggagagggaacaagtgacaagtaaa
ttgctggaggtttcagttcaattagagcaatctttgagcaagattccgtatgaggatctt
gacatctccgatgaagttagagaacaggttgagttagttctcagccagtttcggcgagcc
aaaggaagagtagatgcatcagacgatgaactgtatgaagatcttcagtcactgtgcatc
aaaagcagtgacgtagatgattatcaacctaccctgcagcgggttgctaagaagttacat
ctgatggagattcctgacctagctcaagaatcagtggctctgcacgaaatggttgcttcg
agcggtggagatgctggtgaaagcattgaggagatggcaatggtacttaagctgattaag
gattttgtgcagatagagactaacaatagcgaggaccagagtgctggggtaaactcgagt
agcaacgggcaaacttctacggctgcgagtcacaagataccggtgattcctgatgatttc
cgctgtccaatatctctggaaatgatgagagatccagttatcgtttcaacagggcagacc
tacgaacgcacctgcattgacaagtggatagaagctgggcattcgacatgtccaaaaaca
cagcaggcgctaacaagcacaaccctcacacccaactatgttctccgaagtctgatagct
cagtggtgcgaggccaatgatatcgagcctccaaaacctccgagcagtttaaggcccagg
aaagtatcatccttttcctccccagcagaagcaaacaagatcgaagatcttatgtggagg
ctggcttacggaaaccctgaggaccaacgatctgcagctggagaaatccgcctcctcgca
aaacgaaatgcagacaaccgtgtggccatagctgaagctggagccatacctcttctcgtt
ggcctcctcgcaactcctgattctcgtatccaagaacattcggtaacagctcttctaaac
ctctccatatgtgagaacaacaaaggagccattgtctctgctggagctatccctggtata
gttcaagtgctcaagaaaggaagcatggaggctagagagaatgcagcggccacacttttc
agtctctccgtgattgacgagaacaaagtgactattggtgccttgggagcaatcccaccg
ctcgttgtactgctcaatgaaggtacacaaagaggcaagaaagacgcggctactgcactt
ttcaacctctgcatatatcaaggaaacaaaggaaaggccatacgcgcaggagtgattccc
acattgacgagactcttaacagagcccggaagcggaatggtcgatgaggcgcttgccatt
ctggcgattctctcgagccatcccgaagggaaagcaatcataggatcatccgacgcagtc
ccgagtctagtggagtttatcagaactggatctcctagaaacagagagaacgctgctgcg
gttctagtccacctctgttctgttgacccacaacatctggtcgaagcacagaaactcggt
ctcatgggtccattgattgatttagccggaaacgggacagatagagggaaaagaaaagca
gctcaattgcttgaacgtataagccgtctagctgaacagcagaaggagacggcagcacag
gcacaaaacacagaagaagctgaaccaacacattcagcatccaccacagaagctgctgat
acttga
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