Brassica oleracea (wild cabbage): 106310716
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Entry
106310716 CDS
T04124
Name
(RefSeq) histone deacetylase 7-like
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03082
ATP-dependent chromatin remodeling
boe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106310716
03083 Polycomb repressive complex
106310716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
boe03036
]
106310716
Enzymes [BR:
boe01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
106310716
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
106310716
HDAC complexes
Sin3A-HDAC complex
106310716
BRAF-HDAC complex
106310716
REST complex
106310716
SHIP complex
106310716
MiDAC complex
106310716
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
106310716
Heterochromatin formation proteins
Other heterochromatin formation proteins
106310716
Chromatin remodeling factors
NuRD complex
106310716
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
106310716
NCBI-ProteinID:
XP_013603394
UniProt:
A0A0D3DRC0
LinkDB
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Position
C8
Genome browser
AA seq
409 aa
AA seq
DB search
MENAASLASGTDGKKRRVTYYYEPYIGDGSQRVSQQITTTHNLIRSYNLHNDMDIIRPSL
AKDSDFVRFHSPEYITCLATLTPEYVDMANKSENVAETSLELFDLDEWDTPFFPGLIDYC
RLYAGGSICAAAKLNRREADITINWSGGMHRAKRDEARGFGYVNDVVLGILELLKVFKRV
LYIDIGYYHGDAVQEAFYKTDRVMTVSFHESVVQSRGDITDNGVEKGEYYSLNAPLKNGL
NDASFVNLLVPVIHKAMEVYQPEAIVLQCGPDSLAGDALGKFNLTIKGHAACLQYIRSFN
VPLMLLGGQGHTLGNVARCWCYETAVSVGKEIDDDLDTNVSDACFAPGYQLHIEPNRMKN
LNTDGYIAKIKKTLLNQLSQVIHAPSVQFQDTPPISQVTEAAEEDMETR
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgcggcgagcttggcttcaggtaccgacggaaagaaacggcgcgtgacctac
tactacgagccatacatcggcgacggcagtcaacgggtatcccaacagatcactactact
cacaacctcatccgcagctataacctccacaacgacatggatatcatccgccctagcctt
gccaaagattcagatttcgttcggtttcactcgccggagtacataacatgcctcgctact
ctcacgccggagtatgtcgacatggctaataagtcagaaaacgtagccgaaacttccttg
gagctcttcgacttagacgagtgggacacccctttcttccctggcctcatcgattattgc
cgtctctacgctggtggttctatttgcgccgccgccaagctgaaccgacgcgaagctgat
atcaccatcaattggtccggcgggatgcaccgtgccaagagagatgaggctcgtggcttt
ggctacgtcaatgacgttgttcttgggatcctcgagttgctcaaagtcttcaagcgagtt
ctctacatagatattgggtattaccatggggatgcagtacaagaagcgttctacaaaact
gatagagttatgactgtttctttccacgagtctgtggtccaaagcagaggagacataaca
gacaacggggtagaaaagggagaatactattctctaaatgctccactaaagaatggtttg
aacgatgcaagtttcgtcaatttattggtacctgttatccacaaggctatggaggtttat
cagccggaagcaattgttcttcagtgtgggcctgattcactagctggtgacgcgttgggt
aaattcaacttgactatcaagggtcacgctgcatgtctccagtacataagatcatttaac
gttcctctcatgctcttgggtggtcaaggtcacactcttggaaatgttgcacgttgctgg
tgctatgagacagcagtttcggttggaaaagaaattgacgacgatctcgataccaatgtg
tccgatgcgtgttttgccccaggttatcaacttcatattgagccaaaccgcatgaagaat
ttaaacacagacggatatatcgcaaaaataaagaagacattactaaaccaactttcgcaa
gtgatacacgcacctagtgtgcagtttcaagacactccaccaatcagtcaagttacagaa
gcagcggaagaggacatggagacgagataa
DBGET
integrated database retrieval system