KEGG   Brassica oleracea (wild cabbage): 106310716
Entry
106310716         CDS       T04124                                 
Name
(RefSeq) histone deacetylase 7-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03082  ATP-dependent chromatin remodeling
boe03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    106310716
   03083 Polycomb repressive complex
    106310716
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:boe03036]
    106310716
Enzymes [BR:boe01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     106310716
Chromosome and associated proteins [BR:boe03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     106310716
   HDAC complexes
    Sin3A-HDAC complex
     106310716
    BRAF-HDAC complex
     106310716
    REST complex
     106310716
    SHIP complex
     106310716
    MiDAC complex
     106310716
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     106310716
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    106310716
  Chromatin remodeling factors
   NuRD complex
    106310716
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 106310716
NCBI-ProteinID: XP_013603394
UniProt: A0A0D3DRC0
LinkDB
Position
C8
AA seq 409 aa
MENAASLASGTDGKKRRVTYYYEPYIGDGSQRVSQQITTTHNLIRSYNLHNDMDIIRPSL
AKDSDFVRFHSPEYITCLATLTPEYVDMANKSENVAETSLELFDLDEWDTPFFPGLIDYC
RLYAGGSICAAAKLNRREADITINWSGGMHRAKRDEARGFGYVNDVVLGILELLKVFKRV
LYIDIGYYHGDAVQEAFYKTDRVMTVSFHESVVQSRGDITDNGVEKGEYYSLNAPLKNGL
NDASFVNLLVPVIHKAMEVYQPEAIVLQCGPDSLAGDALGKFNLTIKGHAACLQYIRSFN
VPLMLLGGQGHTLGNVARCWCYETAVSVGKEIDDDLDTNVSDACFAPGYQLHIEPNRMKN
LNTDGYIAKIKKTLLNQLSQVIHAPSVQFQDTPPISQVTEAAEEDMETR
NT seq 1230 nt   +upstreamnt  +downstreamnt
atggagaatgcggcgagcttggcttcaggtaccgacggaaagaaacggcgcgtgacctac
tactacgagccatacatcggcgacggcagtcaacgggtatcccaacagatcactactact
cacaacctcatccgcagctataacctccacaacgacatggatatcatccgccctagcctt
gccaaagattcagatttcgttcggtttcactcgccggagtacataacatgcctcgctact
ctcacgccggagtatgtcgacatggctaataagtcagaaaacgtagccgaaacttccttg
gagctcttcgacttagacgagtgggacacccctttcttccctggcctcatcgattattgc
cgtctctacgctggtggttctatttgcgccgccgccaagctgaaccgacgcgaagctgat
atcaccatcaattggtccggcgggatgcaccgtgccaagagagatgaggctcgtggcttt
ggctacgtcaatgacgttgttcttgggatcctcgagttgctcaaagtcttcaagcgagtt
ctctacatagatattgggtattaccatggggatgcagtacaagaagcgttctacaaaact
gatagagttatgactgtttctttccacgagtctgtggtccaaagcagaggagacataaca
gacaacggggtagaaaagggagaatactattctctaaatgctccactaaagaatggtttg
aacgatgcaagtttcgtcaatttattggtacctgttatccacaaggctatggaggtttat
cagccggaagcaattgttcttcagtgtgggcctgattcactagctggtgacgcgttgggt
aaattcaacttgactatcaagggtcacgctgcatgtctccagtacataagatcatttaac
gttcctctcatgctcttgggtggtcaaggtcacactcttggaaatgttgcacgttgctgg
tgctatgagacagcagtttcggttggaaaagaaattgacgacgatctcgataccaatgtg
tccgatgcgtgttttgccccaggttatcaacttcatattgagccaaaccgcatgaagaat
ttaaacacagacggatatatcgcaaaaataaagaagacattactaaaccaactttcgcaa
gtgatacacgcacctagtgtgcagtttcaagacactccaccaatcagtcaagttacagaa
gcagcggaagaggacatggagacgagataa

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