Brassica oleracea (wild cabbage): 106311025
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Entry
106311025 CDS
T04124
Name
(RefSeq) transcription initiation factor IIF subunit beta-like
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106311025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boe03021
]
106311025
Transcription machinery [BR:
boe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
106311025
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
WHD_UBR1
Motif
Other DBs
NCBI-GeneID:
106311025
NCBI-ProteinID:
XP_013603710
UniProt:
A0A0D3DS74
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Position
C8:27383361..27384967
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AA seq
258 aa
AA seq
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MKMEEFGAKKNEDQTLETDFAERPMWLMKCPSLIASALQSLPSTDDSYLPVAKVILSFDP
LAAVDEEETKFVMELARAGSGNIPKRFGLDMSKDFIPMSVFSESSSQGKMSVEGKIKNKF
HMSPRTENMESYGKLCRERATKSMCKNKQIQVIDNATGMYMWPTPGTVAPTGTFEKKKVT
TKTTEMKRTRRDRREMEEVMFNLFERQSHWTLRNLIQDTDQPEQFLKDLLRDLCIYNNKG
SNQGTYELKPEYKRSTQE
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggaagagtttggggcaaagaagaatgaggatcaaactttggaaacagatttt
gcagagagaccaatgtggctgatgaaatgcccttctctcatcgcttctgctctccaatct
cttccttctacggatgattcataccttcccgtcgccaaagtcatcctctccttcgatcct
ctcgctgccgtcgacgaagaagaaaccaaattcgtaatggaattagctagggctggatct
ggaaacattccaaaacgttttggcttggatatgtctaaggatttcattcccatgtctgtt
ttctctgagtcttcttcacaagggaaaatgtcagtagaagggaagattaaaaacaaattt
cacatgagtcctcgtaccgaaaacatggagagctatggcaaactttgccgtgaaagggct
accaagtctatgtgcaaaaacaaacagatccaggtcattgataatgccactggaatgtat
atgtggccaacaccgggaactgtagctcccacgggaacttttgaaaagaagaaagtgaca
accaagacaacagaaatgaagagaacaagaagggatcgaagagagatggaagaggtcatg
tttaatctctttgaaagacaatctcactggactctgaggaacctcattcaagatacagac
caaccagagcaattcttgaaagatttgcttagagatctttgcatttacaacaacaaaggg
agcaaccaaggaacttatgagctgaagcctgagtacaagagatccacacaagaataa
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integrated database retrieval system
