Brassica oleracea (wild cabbage): 106311310
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Entry
106311310 CDS
T04124
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine-rich splicing factor RS31
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106311310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
boe03041
]
106311310
Spliceosome [BR:
boe03041
]
Common components
Common spliceosomal components
SR proteins
106311310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RNA_bind
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
106311310
NCBI-ProteinID:
XP_013603962
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All DBs
Position
C8:complement(33092646..33093932)
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AA seq
261 aa
AA seq
DB search
MLTTPWKRXLHLLYTSLHIYAGFGFVYFEDERDAEDAIRKLHNYRFEKRTLSVEWGRGXR
SRHGDGSYQKPTKTLFVCNFDPFRTKEVDIVEHFQPYGKVINVRMRSNYLFAQFATQEDA
TKAFEATQRSQILGKVIAVEYGLNDDDERDDRRGGGSPKRSPSPAYHRRPIPDYGRPRSP
EYDRGRTYDRRGRSPSAYDRSKSPAACERRMSPADYGHRSPDNGRQRSPSYDRYRSLSPV
PRGRKAEEYEECRTRSYQECL
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcttactacaccatggaaacgcnctctacatctcttgtacaccagccttcacatatat
gcagggtttggttttgtgtattttgaagatgaacgggatgctgaagatgcaatccgcaag
cttcacaactaccgttttgagaaacgcacgctatcagttgaatgggggaggggttaacgc
agcaggcatggtgatgggtcatatcagaagcctacaaagacattgtttgtctgcaacttc
gacccctttagaacaaaagaagtcgacattgtagagcactttcaaccctatggaaaggtc
atcaacgtacgtatgaggagcaactacttatttgctcagtttgcaactcaagaagatgct
acaaaagcctttgaggctactcaaagaagccaaatattgggcaaggttattgctgttgag
tatggcttaaatgatgatgatgaaagagatgaccgacgtggtggtggtagtccgaagaga
tctcctagccctgcgtatcataggcgtccaattcctgattatggtcgtcctcgaagccct
gaatatgacagaggcaggacttatgacagacgcgggaggagtccatcagcttatgacaga
agcaagagtccagcagcttgtgaaagacgcatgagtccagcagattatggacataggagt
cctgataatggtagacaaaggagtccttcttatgacagatacagaagtctatctccagtt
ccaagaggaagaaaagctgaagaatatgaagaatgcagaaccagaagctaccaagaatgc
ttgtga
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integrated database retrieval system
