KEGG   Brassica oleracea (wild cabbage): 106311480
Entry
106311480         CDS       T04124                                 
Name
(RefSeq) autophagy-related protein 18a-like
  KO
K22991  WD repeat-containing protein 45
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:boe04131]
    106311480
Membrane trafficking [BR:boe04131]
 Autophagy
  Other autophagy associated proteins
   Others
    106311480
SSDB
Motif
Pfam: PROPPIN Beta-prop_THOC3 BCAS3_WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_EML_2 WD40_WDHD1_1st WD40 WD40_CDC20-Fz Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_RSE1_2nd Beta-prop_Vps41 Beta-prop_IFT140_2nd CFAP251_N Beta-prop_WDR90_POC16_2nd Beta-prop_WDR3_2nd WDR55 Beta-prop_HPS5 WD40_Gbeta Beta-prop_WDR19_1st Beta-prop_EML EIF3I PEP5_VPS11_N Ge1_WD40 Beta-prop_VPS8 Tricorn_2nd NBCH_WD40
Other DBs
NCBI-GeneID: 106311480
NCBI-ProteinID: XP_013604117
UniProt: A0A0D3DV58
LinkDB
Position
C8:complement(33545829..33547687)
AA seq 424 aa
MTTVSTPSPPWLNPDSTPASDSASTSPSHHRDRGDDAESLDSFSSMTLNSEEFNLNPNPN
LNIQTHTTSPSATTPPPSLLHLSFNQDHACFAVGTDRGFLILNCDPFREIFRRDFDRGVA
VVEMLFRCNILALVGGGPDPQYPPNKVMIWDDHQGRCIGELSFRSDVRSVRLRRDRIVVV
LEQKIFVYNFVDLKLMHQIETFANPKGLCAVSQGAGSMVLVCPGLQKGQVRIEHYASKRT
KFVMAHDSRIACFALTQDGSLLATASSKGTLVRIFNTVDGTLRQEVRRGADRAEIYSLAF
SSNAEWLAVSSDKGTVHVFGLKVNSGVKDTPTRIASNVTRPTSPSSSLSLFKGVLPKYFS
SEWSVAQFRLVEGTQYIVAFGHQKNTVVILGMDGSFYRCQFDPVNGGEMAQLEYHNCLKP
PSVF
NT seq 1275 nt   +upstreamnt  +downstreamnt
atgaccaccgtctccaccccttctcctccctggctaaatcccgattctacccctgcatca
gattccgcctctacttctccctcgcaccaccgcgatcgcggagacgacgccgagtccctc
gactccttctcctccatgactctcaactccgaagagttcaatctaaatcccaacccgaac
ctcaatatccaaacgcatacaacatctccctcggcgacgacgcctcctccgtcgctgctc
cacctctccttcaaccaagaccacgcctgcttcgccgtcggcaccgaccgcggcttcctg
atcctcaactgcgacccgttccgcgagatcttccggcgcgatttcgaccgcggggtcgcc
gtcgtggagatgctcttccgatgcaacatactcgccctcgtcggcggaggacccgatccg
cagtaccctcccaacaaggtcatgatatgggacgaccaccagggccggtgcatcggcgag
ctctccttcaggtccgacgttcgatccgtcaggctcaggagggatcggatcgtcgtcgtc
ctcgagcagaagatcttcgtttacaacttcgtggacctcaagctgatgcatcagatcgag
accttcgcgaaccctaaggggctgtgcgctgtttctcagggtgctggctctatggtgttg
gtctgccctggcttgcagaaagggcaagttaggatcgagcactatgcctctaaacggact
aagttcgtcatggctcatgactcgaggatagcttgcttcgctctcactcaggatgggagc
ttgttggccacggctagctccaagggcactctggttcggatctttaatactgtcgatggc
accttgcgccaagaggttaggaggggtgcagatagagcagagatatatagtttggctttc
tcttcaaatgctgagtggttggctgtctcgagtgataaagggactgtccatgtctttggt
ctcaaagtcaactccggcgtgaaagacactcccacccgaattgcatctaatgttactcgt
cctacctccccgtcctcgtctctgtcgttattcaaaggagtgttgcccaagtatttcagc
tcggagtggtcggtggctcagttcaggttggtggaaggaactcagtacatagtcgccttt
ggtcatcagaagaacactgttgttattcttggcatggatgggagcttctacagatgtcag
tttgatccggtgaatgggggagaaatggctcagcttgagtatcacaactgtctaaaaccg
ccgtctgttttctag

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