KEGG   Brassica oleracea (wild cabbage): 106311533
Entry
106311533         CDS       T04124                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106311533
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:boe03041]
    106311533
Spliceosome [BR:boe03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    106311533
 Complex B
    106311533
 Complex C
   U2 SnRNP specific factors
    106311533
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin
Other DBs
NCBI-GeneID: 106311533
NCBI-ProteinID: XP_013604177
UniProt: A0A0D3DPQ1
LinkDB
Position
C8:21089623..21093215
AA seq 783 aa
MLSSMQILPLEAPPTDGNLGPLPPSQLTDQEIEERELQSEQTRSNQAPESVATHTRTIGI
IHPPPDIRSIVEKTAQFVSKNGLEFEKRIMASNAKNAKFNFLTSSDPYHAFYQHKLAEYR
AQNEDGAQGNDADGADLQLDGGGDEGEAGEAKPDLQAQFRVPPKPLEPPEPEKYTVRLPE
GITGEELEYIKLTAQFVARNGKSFLTGLQSRENNNPQFFFMKPTHSMFPLFTSLVDAYFD
VLKPPEDLKEKLRKSAADLTTVLERCLHRLEWDRSQEQQRKKEEDEKEQERVQMAMIDWH
DFVVVESIDFADEEDEELPPPMTLEEVIRRSKVSAAMEEDEVVEPGKEVEMEMDEEEMKL
VADGMRAANLEENGVYVRIENMNEEAPMRIVKNWKRPEDRIPTERDPTKVVISPITGELI
PINEMSEHMRISLIDPKFKEQKDRMFAKIRETTLAQDDEIAKNIVGLARLRPDIFGTTEE
EVSNAVKAEIEKKKDEQPSQVIWDGHTGSIGRTANQALAQNANGEEQGNGVYGDPNSFPG
PAALPPPRPGVPVVRPLPPPPNLALNLPRPPPSVQYPPRPLGVPMMQAMHPQHQLSMPGQ
PGHPSMMMMNRPPQMQPGGMHVPPPPGSQFAHLQVPRPYGQLAPPPIGMMQPPPMHGMPP
PPPPGEAPPPLPEEPEPKRQKLDESALVPEEQFLAQHPGSATIRVSVPNVDDGQVIEITV
QSLSENVGSLKEKIAGETQIPANKQKLSGKAGFLKDNMSLAHYNLGAGEILTLSLRERGG
RKR
NT seq 2352 nt   +upstreamnt  +downstreamnt
atgttaagttcgatgcagatactgccactcgaggctcctcccaccgacgggaacctcggc
ccgctccctccttcgcagctaaccgatcaagaaatcgaagagagagagttgcaatcggag
cagaccagatcgaatcaagctccggaatctgtagcgactcacacgaggactatcggaatc
attcacccgcctccagatatcagaagcatcgtcgagaaaacggcgcagtttgtttccaag
aacgggttggagttcgagaagaggatcatggctagcaatgccaagaatgctaaattcaac
tttttgaccagctctgatccgtatcatgcgttttaccagcataagctcgctgagtatcgt
gctcagaatgaagatggggctcagggtaatgatgcagatggtgcagatcttcaacttgat
ggtggtggtgatgagggtgaagctggtgaggcgaagcctgaccttcaggctcagtttagg
gttcctcctaagcctttagagcctccggagcctgagaagtatacagttagacttcctgaa
gggattacaggcgaggagcttgagtatattaagctcacagcccagtttgtggcgcggaat
gggaagtctttcttgactgggttgcagagtagagagaataacaatcctcagtttttcttt
atgaagccaactcatagcatgttccctttattcacttctctggttgatgcgtatttcgat
gtgttaaagcctcctgaggacttgaaagagaagctgaggaagagtgccgctgatttgacg
accgttcttgagcggtgtttgcatcgtcttgagtgggatcggtctcaggagcagcagaga
aagaaagaggaggacgagaaggagcaggagagagtgcagatggctatgattgattggcat
gattttgtggttgtggagtctattgattttgctgacgaggaggacgaggagttgccaccg
cctatgacgcttgaggaggttataaggaggagcaaagtatctgcagcgatggaggaagat
gaagttgtggagcctggaaaggaagtggagatggagatggatgaagaggagatgaagctt
gttgcggatggaatgagagcagcgaacctggaagagaatggtgtctatgtaaggattgaa
aatatgaacgaagaagcacctatgagaatcgttaagaactggaagaggccagaagatagg
atcccgacagagagagatcctacaaaagttgttatatctccgattactggcgagctgatt
ccaatcaatgagatgtctgagcacatgcggatttcgcttattgatcccaagttcaaagag
cagaaggaccgtatgtttgctaagattcgtgagaccactcttgcacaagatgacgagatt
gctaaaaacattgtcgggcttgctcgtctgcgtcctgatatttttgggacgactgaagaa
gaagtctcaaatgctgtaaaggcggagattgagaagaagaaagatgagcagccaagtcaa
gtaatatgggatggtcacacaggaagtataggtcgcacagcaaaccaagccttggctcag
aatgctaatggagaagagcaaggtaatggcgtttatggagatcccaatagcttccctggt
ccggctgctcttcctcctcctcgaccaggtgtcccagtagtccggccactgccaccacct
cctaatctcgccttgaacctccctcgccctcctccttctgttcagtacccaccaaggcca
ttaggtgttccaatgatgcaagccatgcatccacaacaccagctttcgatgcctggacaa
cctggacacccgtcgatgatgatgatgaaccgaccaccacaaatgcagcctggtggtatg
catgtgccgcctccaccgggatcacaatttgctcatcttcaagttccgagaccttatggt
cagcttgcaccacctcctatagggatgatgcaaccaccacctatgcatgggatgcctcct
cctccaccccctggggaggcaccaccgcctcttcccgaggagccagagccaaagagacag
aagctcgacgaatcagctcttgttcccgaagaacaatttcttgctcagcatccgggctct
gctacgatccgtgtctctgttccaaatgtggatgacgggcaggtcattgagatcacagtg
cagtcattatccgaaaacgtgggaagtttgaaggagaaaatagctggtgaaacacaaatt
ccagcaaacaaacagaagttgagtggcaaagctgggttcttaaaggacaacatgtcactt
gcacactacaatcttggagcaggagaaatcttaacactatctttgagagaacgtggtggg
agaaagagataa

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