KEGG   Brassica oleracea (wild cabbage): 106311554
Entry
106311554         CDS       T04124                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106311554
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:boe03041]
    106311554
   03400 DNA repair and recombination proteins [BR:boe03400]
    106311554
Spliceosome [BR:boe03041]
 Complex B
  Other components
   Prp19 complex
    106311554
 Complex C
   Prp19-CDC5 complex
    106311554
DNA repair and recombination proteins [BR:boe03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    106311554
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect
Other DBs
NCBI-GeneID: 106311554
NCBI-ProteinID: XP_013604207
UniProt: A0A0D3DNR8
LinkDB
Position
C8:19053449..19056544
AA seq 847 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLLPTQWRTIAPIVGRTPSQCLERYEKLLDAACTKDESYEAADDPR
KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LASLQKRRELKAAGIGNSHRKRKRKGIDYNAEIPFEKRAPAGFYDTADEDRPADQVKFPT
TIEDLEGRRRADVEAQLRRQDVARNKIAERRDAPAAILQANKMNDPEAVRKRSKLMLPPP
QISDHELEEIAKMGYASDLLAENEELTEGSAATRALLANYSQTPRQGMTPMRTPQRTPAG
KGDAIMMEAENLARLRDSQTPLLGGENPELHPSDFTGVTPRKKEIQTPNPMLTPSMTPSM
TPGGAGLTPRLGLTPSRDGSSFAMTPRGTPFRDELHINEDMDMHESAKLEGQRREEARRS
LRTGLTGLPQPRNEYQIVAQPPPEESEEQEEKIEEDMSDKIAREKAEEEARQQALLRKRS
KVLQRDLPRPPAASLELIKNSLLSANGDKSSVVPPTPEEVADKLVRRELLQLLEHDNAKY
PLDGKAEKKKGAKNRANSSGSQVTPIEDFEENDLEEADKMIKEEGKFLCKAMGNENKTLE
DFVKAHDDCVKDLMYFPTRNAYGPSSVAVKAEKVAALQVEMENARKKMEEDEKKAEHMKA
KYKTYTKGHEKRAETVWSQIEASLKQIEIGGTEVECFKALKRQEEMAASFRKKNLEEEVV
KQKETERKLQASYGKLLSTLEKAEEIMVGFRVQALKQADVEDSHNLKEAKLATGEEEDVA
ISTEASS
NT seq 2544 nt   +upstreamnt  +downstreamnt
atgaggattatgatcaagggaggtgtgtggaagaacaccgaagatgagatcctcaaagcc
gccgtgatgaagtacggcaagaaccaatgggctcggatctcgtctctccttgttcgcaag
tctgctaaacagtgtaaagctcgttggtacgaatggctcgatccttctatcaaaaagact
gaatggactagagaagaagatgagaagcttctacatcttgccaaactactacctactcag
tggagaactattgctcctattgtggggcgtacaccctctcagtgccttgagaggtacgag
aagcttcttgacgcagcgtgcactaaggacgagagttacgaagcagcggatgatccgaga
aagctgcgtcccggtgagatcgaccccaacccggaatcgaagcctgctcgccctgatccg
gtggatatggacgaagacgagaaagaaatgctttctgaagcgagggcgaggttggctaac
actagggggaagaaggctaagagaaaagctagagagaagcagctcgaggaagcgaggagg
cttgcttctttgcagaagaggagagagttgaaggcggctgggattggtaatagtcatagg
aaaaggaaacggaaggggattgattataatgcggagattccttttgagaagagggcgcct
gcggggttttatgatactgctgatgaagatcgtcctgctgatcaggtgaagtttccgaca
accattgaggatcttgaagggagaagaagagctgatgtggaagcgcagttgcgcagacaa
gatgttgcgaggaacaaaattgctgagagaagggatgctccagcagctatattgcaagcg
aataagatgaatgatcctgaagctgttaggaagaggtcgaagctaatgttaccgccaccg
cagatttcagatcacgagttagaggagattgcaaagatggggtacgctagcgatcttctt
gcggagaatgaggagctaacagaaggcagtgctgctactcgtgcgcttttggcgaattac
tcacaaacaccaaggcaagggatgacgcccatgaggacgcctcaaagaactcctgctggt
aaaggtgatgctattatgatggaagcagagaatctggctagattgagagactctcagaca
cctttgctaggaggagagaatcctgagttgcacccttctgacttcaccggggtcactcct
aggaagaaagagattcaaacgcctaatccgatgctgactccttcaatgactccttcgatg
actcctggtggtgccggccttactcccagacttggcttgacgccatcaagggatggttct
tctttcgctatgacacctagaggtactcccttcagggatgaacttcacataaatgaagac
atggacatgcacgagagcgctaaacttgaggggcagagacgagaggaagctagaaggagc
ttacgcactggacttactgggcttcctcagccaaggaacgagtaccagatagttgcacaa
cctcctccagaggaaagtgaagagcaagaagagaaaattgaggaagacatgtcagacaag
atagctagagaaaaggctgaggaggaagcgagacagcaggcactacttaggaaaaggtcc
aaggtgttgcagagagatcttcctagacctccagcagcttcgttagaactaattaagaac
tcgttgctttcagccaacggagacaaaagttctgttgttcctcctactccagaagaggtt
gcagataaattggttagaagggagcttctacagttgctggagcatgataatgcaaagtat
cctcttgatgggaaagctgagaaaaagaaaggagccaagaaccgtgctaacagttctggt
tctcaagttactccaatcgaagattttgaggaaaatgatctcgaagaggctgacaagatg
ataaaggaggaggggaagtttctttgcaaggcaatgggaaacgagaacaagacccttgaa
gatttcgtaaaagctcacgacgattgcgtgaaggatctcatgtacttccccacacgaaat
gcttacgggccctcaagtgttgctgtgaaggcagagaaagttgcagctttgcaagtggag
atggagaatgcgagaaaaaagatggaggaagatgagaagaaggcagaacatatgaaggct
aagtataaaacttacacaaagggtcatgagaaacgggcagagaccgtgtggagccaaata
gaggcgagtttgaagcagattgagattggtggaacagaagtggagtgctttaaagcattg
aagaggcaagaagagatggctgcgtctttcaggaagaagaatctggaggaagaagtggtc
aagcaaaaggagacggagaggaaactgcaagcgagctatggaaaactgttgtcaacgctt
gaaaaagcagaggagataatggtcgggttccgagtacaagcattgaaacaagcggacgtt
gaagattctcacaatctgaaagaagctaagctagccactggagaggaagaggacgttgcc
atatccacggaagcttcttcttaa

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