Brassica oleracea (wild cabbage): 106311568
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Entry
106311568 CDS
T04124
Name
(RefSeq) probable starch synthase 4, chloroplastic/amyloplastic isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00500
Starch and sucrose metabolism
boe01100
Metabolic pathways
boe01110
Biosynthesis of secondary metabolites
Module
boe_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
106311568
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
boe01003
]
106311568
Enzymes [BR:
boe01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
106311568
Glycosyltransferases [BR:
boe01003
]
Polysaccharide
Storage polysaccharide
106311568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_trans_1_4
Glycos_transf_1
Glyco_transf_4
Glyco_trans_4_4
CCDC-167
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
106311568
NCBI-ProteinID:
XP_013604226
LinkDB
All DBs
Position
C8:16346184..16351124
Genome browser
AA seq
1021 aa
AA seq
DB search
MTTTKLSSCFLTNGLVGISCKREHGGSPRFFYPPSRRLLPASCKIRQQRGFDSSKRQDIK
KGSPEPILPINSSLQSNSEEEDSQPDNGSADTIHSTVETNHVDSSTENRDEDVQQSEVTR
LKNKHTKKKESDGQDLNVLTVPEVAKALSINKSGGEQFSDGQFGELMTMIRNAEQSDILR
LDQARVSALAELSKILSEKEALQGEINVLEMKLAETDERIKTAAQEKVRVELLEEQLEKL
RQEMVSPPPESDGYVLALSKEIETLKIENLSLRNDIETLKSKLESVENTDERVVVLEKEC
SGLESSVKDLESKLLVSQEDVSKLSSLKTECSDLWTKVESLQLLLDRATKQAEQAVLVLQ
QNQDFKSRVEKIEESLKEANVYKESSEKIQQYNELMQDKVELLEERLEKSDAEIFSYVQL
YQESIKEFQETLERLKEESNRKEPRDEPVDDMPWDYWSRLLLTVDGWLLEKKIGSDDAES
LREMVWKKDRRIHDTYIDVKDKSERDAISAFLKLVSSPTSQGLYVVHIAAEMAPVAKVGG
LGDVVAGLGKALQRRGHLVEIILPKYDCMQYDRVRDLRALDTVVESYFDGKLYKNKIWIG
TVEGLPVHFIEPQHPSKFFWRGQFYGEKDDFKRFSYFSRAALELLLQSGKKPDIIHCHDW
QTAFVAPLYWDLYAPKGLDSARICFTCHNFEYQGTSSASDLGSCGLDVNQLNRPDRMQDH
SSGDRVNPVKGAIIFSNIVTTVSPTYAQEVRTSEGGKGLHSTLNSNSKKFIGILNGIDTD
SWNPATDPFLKAQFNARDLQGKEENKYALRKQLGLSSAESRRPLVGCITRLVPQKGVHLI
RHAIYRALELGGQFVLLGSSPVPHIQREFEGIEQQFKSHDHVRLLLKYDEALSHSIYAAS
DMFIIPSIFEPCGLTQMIAMRYGSIPIARKTGGLNDSVFDIDDDTIPTQFQNGFAFQTAD
EQGLNYALERAFNHYKKDEEKWMRLMEKVMSIDFSWASSATQYEELYTRSVAKARASPNR
T
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacgaagctatcaagctgtttcttaaccaatggattagtaggaatctcctgc
aaaagagagcacggaggttctcctcgatttttctatcccccttctcgtcgattgcttcct
gcttcctgtaagatccgacaacaacgtggtttcgactccagtaaaagacaagatatcaag
aaaggctctcctgaaccaatcctacccattaactcaagtcttcagagcaacagcgaggag
gaggactcacaacctgataacggttcagcagacactattcattccaccgtagaaactaat
catgtggattcaagtactgaaaacagagatgaagatgtacagcaaagtgaagttactcgg
cttaaaaacaaacatacaaagaagaaagagagtgatgggcaagacttgaatgttttgacc
gttcctgaggttgcaaaagctttgtccattaacaaaagcggaggtgagcagttctcagat
ggacagtttggggagctaatgacgatgataagaaacgctgagcaaagtgatattctccgg
cttgaccaagcacgagtcagcgctctcgccgagcttagcaagatcctaagtgaaaaagaa
gcattacagggagaaatcaacgttctggaaatgaagctagctgagactgacgaaaggatc
aaaaccgccgctcaagagaaagtacgcgtagagcttctagaagaacagctagagaagctt
cgtcaagagatggtttctcctcctccagagagcgatggttatgttctagctcttagcaaa
gagatagaaacgttgaagatagagaatctgtcattgagaaacgatatagaaacgctcaag
tcgaagcttgagagtgttgagaatacagatgaacgtgtggtcgtgttggaaaaggaatgc
tcgggtttggagtcttctgtgaaagatttggagagtaagctgttggtttctcaggaagat
gtttccaagctttcctctctcaaaacagaatgcagtgatctatggacaaaggtggagagt
ctgcagctgctgttagatagagctacaaaacaagcggagcaagcggttttggtgttgcaa
cagaatcaagatttcaaaagcagggttgagaagatcgaggaatcgcttaaagaagccaat
gtttataaagaatcatctgaaaagattcaacagtacaatgagttaatgcaagataaggtg
gaattactcgaggagcggctcgagaagtctgatgcggaaatattctcgtacgttcagtta
tatcaagaatcgatcaaagagttccaggaaacgcttgagagattgaaggaagaaagcaat
agaaaagagccgagagatgaaccggtcgatgacatgccttgggattattggagtcgtttg
cttctaactgttgatggatggctgcttgaaaagaagataggaagcgatgatgcagagtcg
ctgagagaaatggtgtggaagaaagatagaaggatccacgatacgtacattgacgtcaaa
gacaagagtgaacgtgatgcaatctctgcatttctcaagcttgtgtcatctccaacaagt
caaggattgtatgtggttcacattgcagctgagatggcacctgtagctaaggtgggaggt
ttgggggatgttgtggcaggtcttggtaaggccttgcaaagaagaggccatttggtggag
atcatccttcccaaatatgattgtatgcaatatgatcgcgtccgtgacttaagggctttg
gatactgttgtggagtcatactttgatgggaagttatataaaaacaaaatctggataggc
actgttgaaggtttgcctgtacatttcatcgagccacaacatccgagcaaattcttctgg
agaggacagttctacggagagaaagatgacttcaaacgcttctcatacttcagccgcgct
gcattagagttgcttcttcagtccggcaagaaaccagacatcatacattgtcatgactgg
caaacagcttttgttgcgccgctttattgggatctgtatgctccaaaggggttagactcc
gcaagaatatgctttacatgtcacaactttgagtatcaaggtacatcatctgcttcagat
cttggatcatgcggccttgatgttaaccagttaaacagaccagacagaatgcaagatcac
tcatctggagatagagtcaatcctgttaagggtgctatcattttctcaaacattgttaca
acggtgtcccctacttacgcacaagaagttcgaacatctgagggaggaaagggacttcat
tcgacactcaattccaactccaagaagttcattgggatccttaacggcattgacacagat
tcgtggaatccagcgacggaccctttccttaaggctcagttcaacgctagagatctacaa
gggaaagaagaaaacaaatacgcacttagaaagcagcttggactctcttcagcagagtca
agacggcctttggttggttgcatcacaagattagtgccacagaaaggagttcatctaatc
agacatgctatatacagagcgttagagttaggtggacagtttgttcttcttggttctagt
ccagtgcctcatattcagagggaatttgaagggattgagcaacagtttaagagccatgat
catgtccggttgttactcaagtacgatgaagctctgtctcattcgatctacgcagcatct
gatatgttcatcattccttctattttcgaaccttgtggacttacacagatgatcgctatg
aggtatggctccatcccaatcgcgcgtaaaacaggtggcttaaacgacagtgtctttgac
atcgatgatgatacaataccaactcagtttcaaaacgggtttgcatttcaaaccgctgat
gaacagggtttgaactacgcgttggagagggcatttaatcactacaagaaagatgaagag
aagtggatgagactgatggagaaagtgatgagcatagacttcagctgggcatcatcggct
acgcaatacgaagagctctacacgagatcagtggccaaagctagagcttctcctaaccgc
acgtga
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