Brassica oleracea (wild cabbage): 106311575
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Entry
106311575 CDS
T04124
Name
(RefSeq) uncharacterized protein LOC106311575 isoform X1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106311575
03029 Mitochondrial biogenesis [BR:
boe03029
]
106311575
Membrane trafficking [BR:
boe04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
106311575
Mitochondrial biogenesis [BR:
boe03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
106311575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
WD40_RFWD3
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
106311575
NCBI-ProteinID:
XP_013604239
UniProt:
A0A0D3DIR8
LinkDB
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Position
C8:complement(459248..464027)
Genome browser
AA seq
776 aa
AA seq
DB search
MNFEMMESIWSHDQPPLVPSPKPVARQRSRSVFRLLVQREISPKTKSVPRKRWGVRRCDT
ADSPCGTSGETVNEQRHNLISWVEAESLQHLSADYCPLVPPPRSTIAAAFSSDGRTLAST
HGDHTVKIIDCETGKCLKVLSGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAITSECI
RSHDFYRPIASIAFHAEGDILAVASGHKLHIWHYDKTGEDATPAIVLKTRRSLRAVHFHP
HGVPLLLTAEVTDIDSSDSAMTRATSPGHLRYPPPAIFFTNTRSGGSHTSMAAELPLVPL
PYLLLPSYSPDDPRIQYSTAATGPRSAQSRFQSNPSSVEHGGSRTISTPPPPLPLAISGD
LVPETSQARARTSTTAVDAMDIDEAQPVGGGNGGIPRQVSSQSDLLEFGQFQQLFHSRDR
VSWEVPFLQGWLMAQSQAGVLPTGSSGTAPSHTGSSSASHTSTASLEAAVASLEIPGGVN
LYGVSARDRTRFAGSGSGLAGGLASRNAQQEAGADAQPVVNRLPSELASSIAAAELPCTV
KLRVWAHDIKDPCAILRSDKCRLTIHHAVLCSEMGAHFSPCGRYLAACVACVIPHAEADP
GLQTLVQQDSGLATSPTRHPVTAHQVMYELRVYSLEKETFGSVLVSRAIRAAHCLTSIQF
SPNSEHILLAYGRRHGSLLKSIVSDGETTSHFFTVLEIYRVADMELVRILPSSEDEVNVA
CFHPSPGGGLVYGTKEGKLRIFRYNTAAASNLTAPNSSPEENLAEVELLRRCRLMH
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcgagatgatggaatccatctggtcacacgatcaacctccgctggttccttca
ccaaaaccagtggctcgccaaaggtctaggagcgtcttcaggttgctggttcagagagag
atttcacctaaaacaaagtctgtgcctcggaaacgatggggcgttaggcgatgtgatact
gctgattcaccctgtggaaccagtggcgaaactgtgaacgagcagagacataatcttatt
tcatgggttgaggcagagtcattgcagcatttatctgctgactactgtcctcttgtgcct
cctccaaggtcaactatcgcagcagcttttagttctgatggaagaactcttgcttctact
catggggaccacactgtaaagattattgattgtgagactggaaaatgcttaaaagttctg
agcggccatcggaggacaccctgggtggtcagattccacccacgccactcagaaatagtt
gctagtggaagtttagatcatgaggtgcgcttgtggaatgcaataacttccgagtgtatt
agatctcatgatttctatcgacctattgcttccatagctttccacgctgaaggtgatata
cttgctgttgcatctggtcataagttgcacatatggcattacgataagacaggggaggac
gcaacaccagcgattgtcttgaagacgaggcgttccctgagagctgtacacttccatcca
cacggggttcctcttctcttgactgcagaggtgactgacattgattcatcagattccgca
atgactagagcaacatctccaggccatttgcgatatccacctcctgctattttcttcacc
aacactcggagtggtggcagtcataccagtatggcagcggaactgccacttgtgccatta
ccgtacttgcttttgccgtcatactctcctgatgatccaagaatccaatattctactgct
gctactggtccaaggagtgcacaatcaaggtttcagagtaatccaagttcagtagaacac
ggaggcagcagaacaatttctactcctcctcctcctcttcccttggctatttccggtgat
cttgtcccagaaacctcccaagctagagctagaacttcgaccactgccgttgatgctatg
gatatagatgaagctcaacctgttggtggaggaaatgggggaattcccaggcaagtgtca
agtcaatcagatttgctcgagtttggacagtttcagcaattatttcactcaagagacaga
gtttcgtgggaggtaccatttctacaagggtggttgatggctcaaagccaggctggtgtt
cttcccactggtagtagtggcacagctccttctcatacaggctcttcttcagcgtctcat
acatccacagccagtctagaggctgcagtggcctcgttagaaattcctggtggtgttaac
ttatatggggtttctgcaagagaccgaacccgcttcgcaggatctggatctggtttagca
ggaggtcttgcctctcgtaacgctcaacaggaagctggagctgatgctcagcctgtggta
aacagactcccctccgaactggcttcttcgattgctgctgcagagttgccttgtactgtc
aaacttagagtgtgggcacatgacatcaaagacccatgtgcaatactaaggtccgacaag
tgccgattaacaatacatcacgctgttctttgcagtgaaatgggagcccatttttcgcca
tgtgggagatatttagcagcttgtgttgcatgtgttattcctcatgctgaggcagatcct
ggtttgcagactctggtccaacaagattcaggccttgcaacttcccctactcggcatcct
gtaacagcacatcaagtcatgtatgaacttcgtgtgtattctctcgaaaaggaaacattt
ggttcagtgcttgtgtcacgggcaattagggctgctcattgcttgacctctatccagttc
tctccaaactccgagcacatattgcttgcatatggtcggcgtcatggttctcttttgaag
agcattgtgagtgatggagaaacaacatcacactttttcacagtgttggagatttacaga
gttgcagatatggaactggtgagaatacttccaagctcagaggatgaagttaatgttgct
tgctttcatccttctcctggaggaggtcttgtttatggaacaaaggaggggaagcttagg
atcttccggtacaacacagctgctgcgtccaacctcactgcaccaaacagctcacctgag
gagaacctggccgaggtagaattattgagaaggtgcagacttatgcattag
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