Brassica oleracea (wild cabbage): 106311597
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Entry
106311597 CDS
T04124
Name
(RefSeq) protein argonaute 1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106311597
03036 Chromosome and associated proteins [BR:
boe03036
]
106311597
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
106311597
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106311597
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
106311597
microRNA pathway
RISC loading complex
106311597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Gly-rich_Ago1
Motif
Other DBs
NCBI-GeneID:
106311597
NCBI-ProteinID:
XP_013604277
UniProt:
A0A0D3DJR1
LinkDB
All DBs
Position
C8:2991969..2997739
Genome browser
AA seq
1055 aa
AA seq
DB search
MVRKKRTDGSSEGGEGSGSREAGPHSGGGRGRGGYQQGGGRGGGVQQQGGRGYGPQSQQG
GRGGGRGAGRGYGQPPQQYGGPREGQPPQQYGGPRGGPPRGGHGGGGRGGAPSAGQPQRQ
SVPELHQATSPTYQAVSSQPTPSEVSPTRIPDTSAPVQEFEQLSIEQGASSQAIQPIPSS
SKAFKFPMRPGKGQVGKRCMVKANHFFAELPDKDLHQYDVTITPEVTSRGVNRAVMKQLV
DLYRESHLGRRLPAYDGRKSLYTAGPLPFVSKEFRILLHDEEEGAGGQRREREFKVVIKL
AARADLHHLGMFLQGKQADAPQEALQVLDIVLRELPTSKYTPVARSFYSPDIGRKQSLGD
GLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEALPVTEFVCQLLNRDIRSRPLSDADRVK
IKKALRGVKVEVTHRGNMRRKYRISGLTAVATRELTFPVDERNTQKSVVEYFYETYGFRI
QHTQLPCLQVGNSNRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPQEREKDIL
RTVELNDYSHDPYAKEFGIKISASLASVEARILPPPWLKYHESGREGTCLPQVGQWNMMN
KKMINGGTVSNWICINFSRQVPDNMTRSFCQELAQMCHISGMAFNPEPVLPPVSARPEHV
EKVLKTRYHDAMAKLSQGKEIDLLIVILPDNNGSLYGDLKRICETELGIVSQCCLTKHVF
KMSKQYMANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPS
IAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKEWKDPQKGVVTGGMIKELLIAFRRS
TGHKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEAGYQPPVTFVVVQKRHHTRLF
AQNHNDRNSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNF
SADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGSMAR
GGGMGGRNMRGPHVNAAVRPLPPLKDNVKRVMFYC
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaagaagagaactgatggttcgtctgaaggaggtgaagggtctggctcccgt
gaagctggtccacactctggtggtggtcgtggtcgtggtggttatcagcaggggggagga
agaggaggaggagtacagcagcaaggtggaagaggttatggacctcagtctcaacaggga
ggtcgtggtggtggtcgtggtgctggtcgtgggtatggccagccaccacagcagtacggt
ggaccaagagaaggtcagccaccacagcagtacggtggaccaagaggaggaccacctcga
ggtgggcacggcggtggtggccgtggaggtgcgccctctgctggacagccacagagacaa
tcagttcccgagctgcatcaagctacctcaccaacttatcaagcggtgtcttctcagcct
acaccgtctgaggtgagtcctacacggattccggatacttctgctccggttcaagaattt
gaacagctctctattgaacaaggagcttcgagtcaggcaatccagcctattccatcttcc
agcaaagcttttaagttcccaatgaggcctgggaaaggacaggtcggcaagcgttgcatg
gtaaaggccaaccacttctttgctgagttgcctgacaaagatttgcaccagtacgatgtt
actattactccagaagtcacatcaaggggtgttaatcgtgctgtgatgaaacagttggtt
gacttgtatcgtgagtcacaccttggaagacgtcttcctgcatatgatggtcgcaaaagt
ctctacactgctggaccgcttccatttgtttccaaggaattcagaatcttgcttcatgac
gaggaagaaggggctgggggacaaagacgagaaagggagttcaaagttgtgatcaagcta
gctgcacgtgctgatttgcatcacctaggaatgtttctacaagggaaacaagctgatgcc
cctcaggaggctctgcaggttcttgatattgttcttcgtgagctgccaacttccaagtat
actcctgtggcccggtcattttattctcctgatatagggagaaagcaatcattgggggat
ggcttggagagctggcgtggattctaccaaagcattcgtcccacacagatgggtttatca
ctcaacatagatatgtcatcgacagcattcatagaggcacttcctgtgactgaatttgtt
tgccagttgctgaatagggatattagatctcggcctttatctgatgctgatcgtgtgaag
atcaaaaaggctcttagaggtgtcaaggttgaagtgacccatcgaggaaatatgcgccgg
aagtaccgcatttctggcctgactgctgtggccactcgagaactgacatttcctgttgat
gaaagaaacacccagaagtctgttgttgaatacttctacgaaacatatggctttcgcatt
cagcacacacagcttccgtgcttgcaagttgggaattctaacaggccaaattatctacca
atggaggtctgcaagatagttgagggtcagagatactcaaaaaggttgaacgagagacag
atcactgctctgctgaaggtgacttgtcagcgcccccaagaacgagaaaaagatatctta
cgaacggtggagctaaatgattacagtcacgatccctatgctaaggagtttggcatcaag
ataagtgcgtctcttgcctctgttgaagctcgaattctgcctcctccatggctcaagtat
catgaatccggaagggaagggacttgtctgccacaagttggtcagtggaatatgatgaat
aagaaaatgatcaatggcggaacagtgagcaactggatctgcattaatttctctaggcaa
gtgcctgacaatatgacacgttctttctgtcaggaacttgctcagatgtgtcacatatct
ggcatggcctttaatccagaaccagtcctcccacccgttagtgctcgccctgagcatgtg
gagaaagtcctgaaaactcgatatcatgatgccatggccaagctatctcaaggaaaagag
attgatctccttattgtcattctgccagacaataatggatcattatatggtgatctgaag
cgcatctgtgagaccgaactcggcattgtgtctcagtgctgcctgactaagcatgtcttc
aagatgagcaagcagtatatggctaatgtggctttgaaaattaatgtcaaagttggagga
aggaatacagtgcttgttgatgccttgtcaaggcgaattcctctggtcagtgatcgccct
accataatctttggtgctgatgtaacccatcctcatcctggagaggattcaagcccgtct
attgctgctgttgtcgcatcccaggactggcctgaagttaccaaatatgctggactggtt
tgtgctcaggcgcacagacaggagctcattcaggatctgttcaaagaatggaaggatcct
cagaaaggggtggtgactggtggcatgataaaggagttacttatagccttccgtagatca
actgggcataagccgttgaggatcatattctatagggacggagttagtgaaggacaattc
tatcaggttttgctctacgagcttgatgccatccgcaaggcatgtgcctcgctggaagca
ggttatcagccaccagtgacgtttgtggtggtgcagaagcgccatcacacgaggctcttt
gctcagaaccataatgatcgtaattcagtggatagaagtggcaacatcttaccaggaact
gtcgtggattccaaaatatgtcaccctacggagttcgacttttacctctgtagtcatgct
ggtattcagggcacttctcgacctgctcattaccacgttctttgggatgagaacaacttc
tctgctgatggactccagtctctaaccaataacttatgttacacgtatgcgagatgcact
cgttctgtatccattgtgccgcctgcgtactatgcgcatctagcagcgttcagggctcgg
ttctacatggagccagagacatcagacagtggttcgatggcgagcgggagcatggcacgt
ggaggtggtatgggtggtagaaacatgcgtgggcctcacgtgaacgctgctgtgaggcca
ctcccacctttgaaagataacgtgaagcgagtgatgttctactgctga
DBGET
integrated database retrieval system
