Brassica oleracea (wild cabbage): 106311620
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Entry
106311620 CDS
T04124
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03082
ATP-dependent chromatin remodeling
boe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106311620
03083 Polycomb repressive complex
106311620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
boe03036
]
106311620
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
106311620
Histone modification proteins
HAT complexes
HATB complex
106311620
HDAC complexes
Sin3A-HDAC complex
106311620
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
106311620
PRC2.2
106311620
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
106311620
Heterochromatin formation proteins
Other heterochromatin formation proteins
106311620
Chromatin remodeling factors
NuRD complex
106311620
NuRF complex
106311620
NuRF complex (fruit fly)
106311620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
EIF3I
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_SPT8
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_IP5PC_F
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
106311620
NCBI-ProteinID:
XP_013604305
UniProt:
A0A0D3DWG7
LinkDB
All DBs
Position
C8:complement(36200963..36204154)
Genome browser
AA seq
507 aa
AA seq
DB search
MESDEAAAAGAASPSGGNVTPAPKKRGRKPKSKDESQTQQEQEKSGGKMKESGKKTKQGE
QSVDEKYTQWKGLVPILYDWLANHNLVWPSLSCRWGPQIEQATYKNRQRLYLSEQTDGSV
PNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIIA
THTDSPDVLIWDVETQPNRHAVLGAAHSRPDLILTGHQDNAEYALAMCPTEPFVLSGGKD
KSVVLWSIQDHITTAGSTDSKSSGSIIKQTGDGGDKTESPSLGPRGVYHGHDDTVEDVAF
SPTSAQEFCSVGDDSCLILWDARTGTSPVTKVEKAHDADLHCVDWNPHDDNLILTGSADN
TVRLYDRRNLTSNGVGTPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDRVS
KKTDRAAKSPAGLFFQHAGHRDKVVDFHWNAEDPWTIVSVSDDCETTGGGGTLQIWRMND
LIYRPEEEVLAELEKFKSHVMTCAPKP
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgacgaagcggcagcggcaggagcagcgtcgccgagcggaggaaacgtgaca
ccggcgcctaagaagagaggccggaaacctaagagcaaggacgagtctcagacgcagcag
gagcaggagaagagcggtgggaaaatgaaggaaagcgggaagaaaacgaagcagggggag
cagagcgtggacgagaagtacactcagtggaaaggtctcgtccccatcctctacgactgg
ctcgccaatcacaacctcgtctggccttccctctcttgcagatggggtccacagatcgaa
caagcaacctacaagaatcgacagcgtctttacctctcagaacaaactgatggcagtgtg
cccaacactctagtcatagcgaattgcgaagttgttaagccaagagtcgctgcggcagag
cacatatctcagttcaacgaagaagcacgttctccatttgtgaagaagttcaagaccatc
attcaccctggagaggtgaaccgaatcagggaactcccacaaaacagtaagattattgct
actcacaccgacagccctgatgttctcatttgggatgttgaaacccaaccaaaccgtcat
gctgtccttggagctgcacattcccgtccggatttgatattaactggacatcaagataat
gctgaatacgctcttgcaatgtgcccaaccgaaccctttgtcctttctggaggcaaggac
aagtcagttgttttgtggagtatccaggaccacatcacaaccgctggtagtacagattcc
aaatcatctggatccatcatcaaacagactggtgatggtggtgataagactgagagtcct
tctcttggcccacgaggtgtatatcatggccatgatgataccgttgaagatgtcgctttc
agccccactagtgcacaagagttctgcagtgtcggtgacgattcttgccttatactatgg
gatgcaagaacaggcactagccctgtcactaaggttgaaaaggcgcacgatgctgatctt
cattgtgtcgattggaaccctcatgatgacaatctgatcctgacagggtctgcagacaac
actgttcggttgtatgatcgtaggaacctaacctcaaatggagtcggtacgcctatttac
aaatttgaaggccacaaagctgctgttctttgcgttcagtggtctcctgacaagtcatct
gtttttgggagttccgcagaagatggtctcttgaacatctgggattatgacagggtcagt
aagaagactgatcgtgcagctaaaagtccggctgggctcttcttccagcatgctggtcac
agggacaaagtagttgatttccactggaatgcggaggacccttggacaattgtcagtgtt
tctgatgactgtgagactactggtggaggtggaacactgcagatatggcggatgaatgac
ttgatttacagaccggaagaggaagttctggcagagttggagaagttcaagtcgcatgtt
atgacatgtgcccccaagccttga
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integrated database retrieval system
