Brassica oleracea (wild cabbage): 106311703
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Entry
106311703 CDS
T04124
Name
(RefSeq) tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4-like
KO
K15443
tRNA (guanine-N(7)-)-methyltransferase subunit TRM82
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
boe03016
]
106311703
Transfer RNA biogenesis [BR:
boe03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
106311703
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
EIF3I
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_DCAF12
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR75_2nd
Ge1_WD40
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_WDR19_1st
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
106311703
NCBI-ProteinID:
XP_013604416
UniProt:
A0A0D3DZ64
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Position
C8:complement(41078211..41080614)
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AA seq
415 aa
AA seq
DB search
MEEPHIEEGHNQNKLLDVAPALISVHPSHKSIAATVGSDLRVFNLIDNSPVTLVDESNES
FHKDSVRAIRYSASGKLFVSTGDDKLVKIWSAESWRCLNTICSEKRVTAVAVSHDDSYVC
YADKFGVVWVVELGGITKKGVPLLSHYCSIITSLEFSPDGRYILSADRDFKIRVTVFPEE
PLQGAHEIQSFCLGHTEFVTCIAFVSNPELTQSYLMSGSGDSTVRLWDIASGSLLDTCEV
STVAGHLESNESEQTQVTVSDLCAIPDSSLAAVAIQSFQGILLLSCDLSAHTLSITKVIQ
IPGESFIPTSISLSTSTLWMVSGASNGPNQPGYSRVRVISCIDSEKSSVLEDEQIPGGTK
LLEKLQGKVSIEESVMIAASEAVRAAMSSLLMKKQYSEEKREFRKRSRNDKKTTN
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacctcacatcgaagaaggacataaccagaacaaactactcgatgttgctcct
gcattgatatcagttcatccatctcacaaatctatcgctgccaccgtcggttcggatctt
cgtgtattcaatctcatagataatagtccagttactttagtggacgaatctaacgagtct
ttccataaagattccgttagagctattcgctatagtgcaagtggaaagctttttgtgtct
acaggagatgacaagctcgttaagatttggtctgctgagtcttggcgctgtctcaacacc
atatgttctgagaaaagagttactgcggttgctgtaagccatgatgattcgtatgtatgc
tatgcggacaagtttggtgttgtatgggtggtcgagcttggtgggatcactaagaagggt
gtgccgctgctttctcattattgtagtattattactagcttggagttttcccctgatggt
cgatatatacttagtgctgatcgggactttaagataagggtgactgtttttcctgaggag
cctctacaaggggctcatgaaatacagagcttttgtcttggacatacagagtttgtcacc
tgcatagcttttgtctccaatccagagcttactcaaagctacctaatgtctggaagtgga
gattcgactgtgcgactgtgggatatagcatctgggtctcttctggacacatgtgaagtt
agtacagtggctggacatttggaatctaatgaaagcgagcaaacgcaagtcacagttagt
gatctatgcgctatccctgattcttctcttgcagcagtggctattcaaagctttcaagga
atattattgctaagctgtgatttgtcagctcatacactctccatcacaaaggtgattcaa
atccctggagaaagtttcatccccacaagtatctctttaagcacatctacactatggatg
gtatcaggagcttcaaatggtcccaaccagcctggttattcaagggttcgtgtcatctca
tgcattgactctgaaaaatcttcagtcctcgaagatgagcagattcctggagggacgaaa
ctgttggaaaaattgcaaggtaaagtttcaatagaagagagtgtgatgattgctgcatca
gaagctgtgagagcagcaatgtccagccttttgatgaagaagcaatactctgaagagaag
agagagttcaggaaaagatcaagaaacgataagaagaccaccaactag
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