Brassica oleracea (wild cabbage): 106311704
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Entry
106311704 CDS
T04124
Name
(RefSeq) pre-mRNA-splicing factor 18-like
KO
K12817
pre-mRNA-splicing factor 18
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106311704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
boe03041
]
106311704
Spliceosome [BR:
boe03041
]
Complex C
Other components
Step II factors
106311704
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Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
AKAP2_C
Motif
Other DBs
NCBI-GeneID:
106311704
NCBI-ProteinID:
XP_013604417
UniProt:
A0A0D3DZ63
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Position
C8:41076361..41078118
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AA seq
414 aa
AA seq
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MDLLRQEILKKRQSLSEEAGGKKFYKRSDIEQKKLQKLREEERREHELKAQRRSAAAASI
SGGKSSGDSSAPGSSTASETAAIADSKSLTDEKNIETLDLPRHEVIRRLRILKQPMTLFG
EDDQARLDRLKYVLKEGLFDVDSDVTDGQTNDFLRDISELKKRQKSGIMMGDRKRKKSTR
DEEGDRGEARDDEISGESSDVDADKDLKRLKSNFEDLCDEDKILVFYKKLLIEWKQELDA
VENTERRTAKGKKNVATFKQCARYLTPLFNLCRKKGLPSDIRQALMVMVNHCIKRDYLAA
MDHYIKLAIGNAPWPIGVTMVGIHERSAREKIHTNSVAHIMNDETTRKYLQSVKRLMTFC
QRRYPTMPSKAVEFNSLANGSDLQSLLAEERYFGGDRGQVSEERLRLMAPLNDN
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggatctgctcaggcaagagattctgaagaagaggcagtctctctccgaggaagctggt
ggcaagaagttctacaaacgatccgatatcgagcagaagaaactccagaagcttcgcgag
gaagagcgacgcgagcatgagctcaaggcccagcgaagatccgccgccgctgcatctatc
agcggtggtaaatcatccggcgattcatctgctcctggctcttccacggcatcggagaca
gctgcgatcgctgattccaaatccctaaccgacgagaagaacatcgaaaccctagatctt
ccgaggcatgaagtgattcgcagattgagaatcctcaagcagccgatgactctcttcggg
gaagacgatcaagctcgtctcgatcggctcaagtacgtgctgaaggaaggcttgttcgac
gttgacagcgatgtcaccgatggacagacgaacgatttcttgcgggacatctctgagctg
aagaagcggcagaagagtggtatcatgatgggagataggaagaggaagaagagtactaga
gatgaggaaggtgatagaggggaagcgagggatgatgagattagtggcgagtctagtgat
gttgatgctgataaggatttgaagcgtttgaagtctaacttcgaggatctttgcgatgag
gataagattcttgtgttctacaagaagctgttgattgagtggaagcaggagcttgatgct
gtggagaacactgagaggagaactgctaaagggaagaagaatgtagccacttttaagcag
tgtgctaggtatcttactcctctcttcaacttatgcaggaagaagggattgccatctgat
attcgtcaagctttaatggtgatggttaaccactgcataaagcgagactacctcgctgca
atggatcactacatcaaactagccataggaaatgcaccatggcccatcggtgtgactatg
gttggtatccacgaacgttccgcgcgagagaagattcacaccaacagtgttgctcacatc
atgaatgacgagaccactcgcaagtatcttcagtcggttaaaagactaatgacgttctgc
cagagacgttatccgactatgccttctaaagccgttgagttcaatagcttagccaacgga
agtgatttacagtctctcctcgctgaagagaggtactttggtggtgatcgtggacaagtc
tcggaagagagactacgcctcatggctcccctgaacgacaactag
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