Brassica oleracea (wild cabbage): 106311705
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Entry
106311705 CDS
T04124
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial isoform X1
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00280
Valine, leucine and isoleucine degradation
boe01100
Metabolic pathways
Module
boe_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
106311705
Enzymes [BR:
boe01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
106311705
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
MCCA_BT
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
HlyD_3
HlyD_D23
ATPgrasp_ST
ATP-grasp_4
ATP-grasp_3
NQRA_N
POTRA_TamA_1
ATPgrasp_TupA
Motif
Other DBs
NCBI-GeneID:
106311705
NCBI-ProteinID:
XP_013604418
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All DBs
Position
C8:complement(41080848..41084928)
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AA seq
738 aa
AA seq
DB search
MSMTVWALRRNVRRKSYSMLVRFTSGSASSGRDTIKPNEQCIEKVLVANRGEIACRIMRT
AKRLGIQTVAVYSDADRDSLHVKSADEAVRIGPPPARLSYLSGAAIMEAAARTGAQAIHP
GYGFSSESSDFAQLCEDSGLTFIGPPASAIRDMGDKSASKRIMGAAGVPLVPGYHGHEQD
IDHMKSEAGKIGYPIIIKPTHGGGGKGMRIVQSEKDFADSFLGAQREAAASFGVNTILLE
KYITRPRHIEVQVFGDKHGNVLHLYERDCSVQRRHQKIIEEAPAPNISEKFRASLGQAAV
SAARAVGYYNAGTVEFIVDTESDQFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGE
PLPISQAEVPLLGHAFEARIYAENVPKGFLPATGVLNHYRPVAVSSSVRVETGVEQGDTV
SMHYDPMIAKLVVSGGNRGEALVKLKDCLSNFQVAGVPTNINFLQKLASHKEFAVGNVET
HFIEHHKTDLFADESNPAAADLAYKAAKHSAALVAACVSAIEHSAWNESNHGKLPSIWHS
HPPFRVHHEAKQTIELEWDNECEGTGSNLVSLGVVYQSDGSYLIQEGDDSPSLEVRVTRA
GNCGFRVEAAGLSMNVTIAAYLKDGYKHIHIWHGSEHHQFKQKVGIEFSGDEEGVQHRTS
SETSSHPPGTVVAPMAGLVVKVLVENEAKVDQGQPVLVMEAMKMEHVVKAPSSGSIHDLK
VKAGQQVSDGSALFRIQG
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgacggtatgggcacttcgtcggaacgttcgccggaaaagctactcgatgctc
gttagattcacctccggctctgcatcttccggaagagatacgatcaagccaaatgagcag
tgtattgagaaggttctggtggctaacagaggcgagatcgcttgccggatcatgagaacg
gcgaagcgtctagggattcaaaccgtcgctgtttacagcgacgccgacagagactctctc
catgtgaagtctgccgacgaagccgtacgaatcggccctcctcccgctcggctcagttac
ctcagcggcgcagctatcatggaggcagcggctcgaaccggcgcacaggcaatacaccct
ggctatgggttctcgtcggaaagttccgactttgctcaactctgtgaagattcgggtcta
acattcattggacctccagcatctgcaattagagacatgggtgataaaagtgcatccaag
agaattatgggggctgctggagttcctctcgtgcctgggtatcatggccatgaacaagat
attgatcatatgaagtctgaagcgggaaagattggttaccctattataatcaaaccaaca
catggaggtgggggaaagggaatgaggatagtgcaaagtgagaaggattttgctgactcg
tttctgggggctcaacgtgaagctgctgcttcttttggtgttaacacaattcttctcgag
aaatacatcactcgaccgaggcatatagaagtccaggtatttggtgacaaacatgggaat
gttctacatctttacgaaagggattgcagtgtgcaaagaagacaccaaaagattattgaa
gaagctcctgcgcctaatatatctgaaaagttccgggctagcttaggccaagctgctgtc
tctgctgcacgggcagttggatattacaatgctgggacggtggagtttatcgttgacact
gagtctgatcaattttattttatggagatgaacactcgtctccaggttgagcatcctgta
actgagatgatcgttggtcaagatcttgtggaatggcagattcgtgttgccaatggagaa
cctctccccattagccaagccgaggtgccattgttaggtcatgcctttgaggcgaggata
tatgctgaaaatgttccaaagggatttcttcctgcaactggagtcctcaatcattatcgc
cctgttgcagtctcatcatcagttcgggtggaaaccggagttgagcaaggcgacactgtt
agcatgcactatgatcctatgattgcaaagcttgttgtctctggaggcaatcgcggcgaa
gctttagtgaaacttaaggactgcttgtctaactttcaggtagcaggtgtacccacaaac
ataaacttccttcaaaaacttgctagtcacaaggagtttgcagtgggcaacgtagaaact
cattttatagagcaccataaaaccgatctattcgctgatgaaagcaatccagctgcagca
gatttggcatacaaggcagctaagcatagtgcagccctggtagctgcttgtgtatccgca
atcgagcattctgcttggaacgaaagtaatcacggaaagcttccatcgatatggcattct
catcctccttttagagtccatcatgaagccaagcaaacgattgagctcgagtgggataac
gaatgcgagggaactggctcgaaccttgtatcactcggtgtagtatatcaatcagatgga
agctatctcatacaggaaggcgatgactctccaagtttagaagtcagagtaacacgagca
ggaaactgcggttttagagttgaagcggccgggttgagcatgaacgttactatagccgcg
tacttgaaggatggttataaacacatccatatatggcacggttcagaacaccaccagttc
aagcagaaggttgggattgaattctctggagatgaagaaggtgtccaacacagaacgagc
tcagaaacatcgtcgcatcctccaggaaccgttgtggcccccatggctggtttggtagtc
aaggtccttgtggaaaacgaagccaaagtagatcaaggtcaacctgtgttagtcatggag
gcaatgaagatggagcatgttgtgaaagcaccgtcttctggaagcatacatgacctcaag
gttaaagcaggccaacaggtttcagatggtagtgctctattcaggatccaagggtaa
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